Commit graph

812 commits

Author SHA1 Message Date
Urban Rotnik
26db4f3515 Add Archive and Restore service 2020-06-09 18:50:36 +02:00
aignatov-bio
37baa13f47 Fi tests 2020-06-09 14:37:45 +02:00
aignatov-bio
c0e984b316 Fix tests 2020-06-04 18:41:45 +02:00
Urban Rotnik
446a2db186 Export and import checklist items with delimiter 2020-06-01 17:19:33 +02:00
aignatov-bio
f963608996 Add I18n and tests 2020-06-01 14:34:04 +02:00
Mojca Lorber
285280827a Refactor repository column base controller 2020-05-28 12:18:46 +02:00
Mojca Lorber
c673e27109 Merge branch 'develop' into ml-sci-4261 2020-05-28 08:18:24 +02:00
Oleksii Kriuchykhin
d77930af61 Fix failing tests for repository rows controller [SCI-4629] 2020-05-18 14:12:06 +02:00
Oleksii Kriuchykhin
c0521c3ca7 Prevent the inventory items editing while snapshot is being created [SCI-4629] 2020-05-15 17:46:59 +02:00
Urban Rotnik
a2ade6e0ec Merge branch 'develop' into features/new-task-layout 2020-05-15 14:27:56 +02:00
aignatov-bio
8ec7a4b7b4 Merge branch 'features/new-task-layout' into ai-sci-4559-add-assigned-tasks-dropdown-to-inventory 2020-05-07 13:03:00 +02:00
aignatov-bio
ff2a7aa9b6 Fix spec markup 2020-05-05 09:47:55 +02:00
aignatov-bio
b01ff206e8 Fix tests 2020-04-28 13:18:57 +02:00
Urban Rotnik
9c3fb063c0 Fix counter and error showing for CheckList column type 2020-04-24 16:09:54 +02:00
aignatov-bio
c2e456aa27 Fix activities and specs 2020-04-23 15:25:28 +02:00
aignatov-bio
10fdd0c1c7 Merge branch 'develop' into features/new-task-layout 2020-04-23 14:07:40 +02:00
Oleksii Kriuchykhin
837437309e Fix failing tests [SCI-4516] 2020-04-09 17:11:58 +02:00
Oleksii Kriuchykhin
3c53be1f9a Add start date to the task [SCI-4504] 2020-03-31 14:17:14 +02:00
aignatov-bio
6d41d4d112 Fix tests 2020-03-31 14:16:31 +02:00
Miha Mencin
ecd49cb1e7 fix format and export_format mess 2020-03-18 09:57:57 +01:00
Miha Mencin
24b979aa6f fix CR comments 2020-03-18 09:53:47 +01:00
Miha Mencin
c89503f691 SCI-4464 fix the import of the dates, some tests 2020-03-17 21:20:50 +01:00
Oleksii Kriuchykhin
675b578272 Add used space calculation method to the team model [SCI-4459] 2020-03-17 16:56:55 +01:00
Alex Kriuchykhin
2a2e479cd3
Merge pull request #2470 from okriuchykhin/ok_SCI_4408
Enable time fraction for task due date [SCI-4408]
2020-03-16 18:55:10 +01:00
Oleksii Kriuchykhin
bece39fbfb Fix failing tests [SCI-4408] 2020-03-16 18:30:17 +01:00
Mojca Lorber
8dac5effbe Another fix 2020-03-13 14:57:26 +01:00
Mojca Lorber
c716a52aae Fix bug with date format when importing to inventory 2020-03-12 12:19:25 +01:00
Oleksii Kriuchykhin
9d0d75acc5 Add API endpoints for new column types [SCI-4276] 2020-02-18 15:13:46 +01:00
Alex Kriuchykhin
9c763f2111 Merge pull request #2383 from okriuchykhin/ok_SCI_4220
Extend inventory import to support new data types [SCI-4220]
2020-02-10 11:04:34 +01:00
Oleksii Kriuchykhin
7d107bf45b Fix tests [SCI-4317] 2020-02-05 11:58:27 +01:00
Mojca Lorber
f0dcf60421 Fix tests 2020-02-04 16:23:06 +01:00
Mojca Lorber
2727614603 Clean up controllers for manage repository columns 2020-02-04 16:05:16 +01:00
Oleksii Kriuchykhin
632b54cb98 Merge branch 'develop' into ok_SCI_4220 2020-02-03 15:50:06 +01:00
Oleksii Kriuchykhin
b0c785f4fb Extend inventory import to support new data types [SCI-4220] 2020-02-03 15:20:01 +01:00
Miha Mencin
0d3e8ac3e1 remove silly test 2020-01-27 15:04:53 +01:00
Alex Kriuchykhin
da26d8a018
Merge pull request #2304 from okriuchykhin/ok_SCI_4204
Refactor repository cell cloning to support all data types [SCI-4204]
2020-01-15 13:04:50 +01:00
Alex Kriuchykhin
9412cccc9c
Merge pull request #2306 from urbanrotnik/ur-sci-fix-for-list-items-update
Fix for list items update
2020-01-15 12:34:33 +01:00
Urban Rotnik
a23b2eab78 Fix list item update 2020-01-15 11:24:50 +01:00
Oleksii Kriuchykhin
9e8bd23616 Merge latest branch 'develop' into ok_SCI_3988 2020-01-15 10:52:20 +01:00
Oleksii Kriuchykhin
66def56af9 Fix test for checklist value [SCI-4204] 2020-01-15 10:21:14 +01:00
Oleksii Kriuchykhin
0e391f6751 Fix tests [SCI-4224] 2020-01-13 17:17:07 +01:00
Oleksii Kriuchykhin
4799e6a1eb Fix failing tests [ok_SCI_4197] 2020-01-10 11:09:47 +01:00
Oleksii Kriuchykhin
522ae12f08 Merge branch 'develop' into ok_SCI_3988 2020-01-07 17:07:22 +01:00
Oleksii Kriuchykhin
fb9493a11c Fix tests [SCI-3988] 2020-01-07 15:30:30 +01:00
Oleksii Kriuchykhin
1b902ff4b3 Merge branch 'develop' into ok_SCI_3988 2020-01-07 15:26:30 +01:00
aignatov-bio
3bd44dc5ab
Merge pull request #2271 from aignatov-bio/ai-sci-4168-refactor-checklist-model
Refactor checklist column data structure [SCI-4168]
2019-12-24 11:12:36 +01:00
Urban Rotnik
400c109592 Refactor StatusesJS for new dropdown 2019-12-23 14:34:11 +01:00
aignatov-bio
54800cb69b Merge branch 'features/new-column-types' into ai-sci-4168-refactor-checklist-model 2019-12-20 15:46:39 +01:00
Urban Rotnik
2e88f194bc Fix tests 2019-12-20 14:58:14 +01:00
Oleksii Kriuchykhin
56b002452e Fix tests for inventories [SCI-4166] 2019-12-19 11:38:26 +01:00
aignatov-bio
dc91893d7e Refactor checklist column data structure 2019-12-18 14:10:41 +01:00
Urban Rotnik
d35f7119b7 Moved delete action to service 2019-12-10 14:29:37 +01:00
Urban Rotnik
82b93bf9a4 Fix failing tests 2019-12-10 14:29:35 +01:00
Urban Rotnik
508a9b4e3e RepositoryRows controller refactor 2019-12-10 14:29:35 +01:00
Urban Rotnik
b68aadf506 Update params nesting 2019-12-10 14:29:35 +01:00
Urban Rotnik
dd9880f030 Add CreateRepositoryRowService 2019-12-10 14:29:34 +01:00
Urban Rotnik
98b89e9e80 Add UpdateRepositoryRowService 2019-12-10 14:29:34 +01:00
Urban Rotnik
0c990ef8cf Add functions for creating new cells with values 2019-12-10 14:29:34 +01:00
Urban Rotnik
5b710241e1 Add delete condition to update_data method on CellValues 2019-12-10 14:29:33 +01:00
Urban Rotnik
79a50860b6 Add methods update_data, data_changed, formatted for all types off ColumnValues 2019-12-10 14:29:29 +01:00
Urban Rotnik
e764e856d8 Fix syntax error 2019-12-10 09:40:40 +01:00
aignatov-bio
09079fbcda Fix naming and tests 2019-12-09 13:48:36 +01:00
aignatov-bio
643abc3fd7 Fixes tests 2019-12-09 13:48:36 +01:00
aignatov-bio
d8676596f1 Add checklists column type 2019-12-09 13:48:36 +01:00
Urban Rotnik
eca0c84bbd Fix tests 2019-12-06 14:20:37 +01:00
Urban Rotnik
65d8d0e35b DateTime HTML and JS simplified 2019-11-29 10:19:57 +01:00
Urban Rotnik
5ae29d549e Add manage modal for DateTime values 2019-11-29 10:19:55 +01:00
Urban Rotnik
f39af1916f Split DateTime and DateTimeRange column types, rename DateType table 2019-11-29 10:19:16 +01:00
Urban Rotnik
d1f23d008a Fix tests 2019-11-29 10:19:16 +01:00
Urban Rotnik
2a20ad68a3 Add range column to RepositoryColumn 2019-11-29 10:19:14 +01:00
Urban Rotnik
fe4aa12ced Add DateTime columns CRUD endpoints 2019-11-29 10:19:14 +01:00
Urban Rotnik
b591346a3f Add DateTime type column 2019-11-29 10:19:13 +01:00
Urban Rotnik
b2ce600820 Add delimiter column for repository_column 2019-11-29 10:19:10 +01:00
Urban Rotnik
804e36650e Add service for updating ListColumnItems 2019-11-29 10:19:09 +01:00
Urban Rotnik
1e8261ac2a Update InventoryColumns API for new Status Type 2019-11-29 10:19:07 +01:00
Urban Rotnik
7ab12baef9 Add API endpoint for StatusItems 2019-11-29 10:19:07 +01:00
Oleksii Kriuchykhin
73be1181ac Fix failing tests for repository states [SCI-4070] 2019-11-29 10:19:05 +01:00
Mojca Lorber
305104f639 Refactor text inventory type 2019-11-29 10:17:53 +01:00
Urban Rotnik
f645ff52ab Refactor ColumnServices 2019-11-29 10:17:52 +01:00
Urban Rotnik
28d7a4f284 Refactor FileColumnController 2019-11-29 10:17:51 +01:00
Urban Rotnik
1720623665 Refactor RepositoryListColumn controller 2019-11-29 10:17:50 +01:00
Urban Rotnik
14b43d516e Add UpdateStatusColumnService service 2019-11-29 10:16:45 +01:00
Urban Rotnik
de2ee66dd4 Add DeleteStatusColumnService service 2019-11-29 10:16:44 +01:00
Urban Rotnik
5930bdd794 Add StatusColumnsController 2019-11-29 10:16:44 +01:00
Urban Rotnik
bbb8c46fe2 Add CreateStatusColumnService service 2019-11-29 10:16:44 +01:00
Urban Rotnik
c00a837105 Add models for RepositoryStatus column type 2019-11-29 10:16:43 +01:00
Oleksii Kriuchykhin
5e8afae1f0 Fix failing tests [SCI-3988] 2019-11-18 15:15:44 +01:00
Oleksii Kriuchykhin
b2862b6c9e Remove Paperclip DB columns and fix experiment templates [SCI-3988] 2019-11-18 14:16:28 +01:00
aignatov-bio
b1f9e7f1ca Fix global activities jsonb field [SCI-3830] (#2030)
* Fix global activities jsonb field

* Fix tests
2019-11-18 13:59:54 +01:00
Urban Rotnik
54c473fa6b Tests fix 2019-11-18 11:11:41 +01:00
Urban Rotnik
b8bf7bbd9b Rename validation 2019-11-18 11:11:40 +01:00
Urban Rotnik
d5716c4260 Add rake task for fixing invalid canvas positions 2019-11-18 11:11:40 +01:00
Urban Rotnik
43e3763ec8 Update x, y, experiment unqiue validation
[SCI-3887]
2019-11-18 11:11:40 +01:00
Urban Rotnik
8b5e346770 Remove file deletion manually 2019-11-18 11:11:39 +01:00
Urban Rotnik
cc9d987321 Add update result(file) and create result(file) API endpoint 2019-11-18 11:11:38 +01:00
Urban Rotnik
060125a1c4 Add file size validation 2019-11-18 11:11:38 +01:00
Urban Rotnik
1be88baab1 Add API endpoint for Attachments resource 2019-11-18 11:11:38 +01:00
Urban Rotnik
e7083e188c Add API endpoint for Step resource
[SCI-3835]
2019-11-18 11:11:37 +01:00
Urban Rotnik
24033bec7a Add API endpoint for Task creation 2019-11-18 11:11:37 +01:00
Urban Rotnik
7802d5ee8b Add uniq validation for x and y position scoped to experiment 2019-11-18 11:11:36 +01:00
aignatov-bio
b9a34fa809 Fix placeholder for authors 2019-11-15 16:23:48 +01:00
aignatov-bio
1488f75e26 Add activities 2019-11-13 13:57:04 +01:00
Oleksii Kriuchykhin
9d2ac4179e Fix failing tests [SCI-3908] 2019-10-04 13:02:18 +02:00
Oleksii Kriuchykhin
0475394b08 Fix test [SCI-3881] 2019-09-16 13:03:41 +02:00
Oleksii Kriuchykhin
3509543e7b Merge branch 'master' into ok_SCI_3881 2019-09-16 11:56:49 +02:00
Oleksii Kriuchykhin
bc38c6b29e Fix failing test [SCI-3745] 2019-09-16 10:26:13 +02:00
Oleksii Kriuchykhin
c068901b00 Upgrade Rails to 6.0 [SCI-3745] 2019-09-12 17:24:08 +02:00
aignatov-bio
1f12a63a25
Fix counter on task inventory and failing test (#2043) 2019-09-10 13:51:37 +02:00
Luka Murn
bff4029e8d Minor typo fix in tests 2019-09-05 11:13:01 +02:00
Oleksii Kriuchykhin
267c53c2d2 Refactor inventory sharing logic [SCI-3803] 2019-08-29 17:21:49 +02:00
aignatov-bio
0810699770
Update shared inventory permissions [SCI-3802] (#2009)
* Update shared inventory permissions

* Fix tests and simplify condition for placeholder
2019-08-23 10:57:02 +02:00
Luka Murn
9ad2490285 Remove the deprecated archive endpoint controller rspec test 2019-08-21 16:00:04 +02:00
aignatov-bio
f94b8165dc
Fix marvinjs edit button and icon (#1985) 2019-08-21 11:15:57 +02:00
Urban Rotnik
89f289660b Add share_with_all feature to service, add new activities 2019-08-14 11:03:15 +02:00
Urban Rotnik
0ce331227c Update permission and model to share repository over all teams 2019-08-13 14:07:24 +02:00
aignatov-bio
737f9e572c
Replace marvinJS logo and fix some merge issues [SCI-3731] (#1976)
* Replace marvinJS logo and fix some merge issues

* Fix tests
2019-08-13 11:04:19 +02:00
Oleksii Kriuchykhin
c352a73d79 ActiveStorage fixies after latest master merge [SCI-3757] 2019-08-09 14:56:00 +02:00
Urban Rotnik
786716974b Add validation for team on TeamRepository 2019-08-09 14:15:50 +02:00
Urban Rotnik
32783576c1 Add controller action 'multiple_update'
Add controller action, add update permission activity, add JS for handling ajax req
2019-08-09 14:15:50 +02:00
Urban Rotnik
6cbece9f86 Add service for multiple share 2019-08-09 14:15:49 +02:00
Mojca Lorber
c21a648c29 Fix failing tests 2019-08-09 14:13:02 +02:00
Urban Rotnik
171cdb319b Add ShareInventory activities 2019-08-09 14:13:01 +02:00
Mojca Lorber
b005f90e95 Add tests for permission can_read_repository 2019-08-09 14:13:01 +02:00
Urban Rotnik
1a77702fa7 Add uniq index for Repository and Team in TeamRepositories 2019-08-09 14:13:00 +02:00
Urban Rotnik
5456c1e38a Add basic controller for TeamRepositories 2019-08-09 14:12:59 +02:00
Urban Rotnik
077369d960 Update permissions for Repositories 2019-08-09 14:12:59 +02:00
Urban Rotnik
f569411bc7 Add TeamRepository model 2019-08-09 14:12:59 +02:00
Oleksii Kriuchykhin
973efa55e1 Merge branch 'master' into ok_SCI_3678 2019-08-08 11:17:07 +02:00
Jure Grabnar
c3fd810691 Remove sample_custom_field factory 2019-08-06 23:30:05 +02:00
Jure Grabnar
f71cabcd60 Fix templates tests 2019-08-05 19:05:15 +02:00
Anton Ignatov
e2e876b2a3 Merge branch 'activestorage_migration' into ai-sci-3728-fix-active-storage-tests 2019-08-05 13:51:04 +02:00
Jure Grabnar
c63737f750 Add check_pending! call for test migrations
Close SCI-3567
2019-07-31 14:57:47 +02:00
Anton Ignatov
f35f4886a3 Fix markup 2019-07-29 10:18:34 +02:00
Anton Ignatov
a4b2825258 Fix tests for active storage 2019-07-26 15:58:51 +02:00
Anton Ignatov
618f0cc334 Fix tests for services 2019-07-26 14:16:44 +02:00
Anton Ignatov
84fe10df47 Fix tests for models and tema import/export 2019-07-26 12:40:36 +02:00
Luka Murn
83bb89fdf5 Cherry-picked commit from ZZ (and LM)'s various changes 2019-07-26 10:13:14 +02:00
Urban Rotnik
795c355f01
Merge pull request #1915 from urbanrotnik/ur-sci-3531-tests-for-step-components
Add tests for StepComponents [SCI-3531]
2019-07-15 13:25:36 +02:00
Jure Grabnar
20120bf2e6 Add test for empty search key 2019-07-15 08:44:02 +02:00
Jure Grabnar
015dae1a05 Fix old tests 2019-07-15 08:27:34 +02:00
Urban Rotnik
5cf100a787 Show 'published_on' instead of 'created_on' on external_protocols list 2019-07-12 16:56:07 +02:00
Anton Ignatov
ffd415d409 Inital refactor for Assets model 2019-07-12 15:02:06 +02:00
Anton Ignatov
57a273d5d0 Merge branch 'activestorage_migration' into features/marvinjs-integration 2019-07-12 11:34:41 +02:00
Jure Grabnar
ed5eb39bb2 Fix tests for GET show on protocols.io 2019-07-10 19:20:40 +02:00
Urban Rotnik
b9bec32316 Add tests for StepComponents 2019-07-10 12:48:08 +02:00
Urban Rotnik
be77746aef Fix description styling of components 2019-07-09 13:41:51 +02:00
Jure Grabnar
05f2210002
SCI-3650, SCI-3655 Fix empty file name, empty description when… (#1892)
SCI-3650, SCI-3655 Fix empty file name, empty description when parsing tables
2019-07-09 10:24:03 +02:00
Jure Grabnar
ae7da78bff
Merge pull request #1897 from jbargu/jg_sci_3646
[SCI-3646] Add paging functionality to external protocols
2019-07-08 13:06:19 +02:00
Miha Mencin
ab9b7a7429
Merge pull request #1902 from biosistemika/release-1.16.6
Merge 'release-1.16.6' into 'master'
2019-07-08 12:49:40 +02:00
aignatov-bio
291563c80e
Fix tests for 1.16.6 release (#1903)
* Fix tests for 1.16.6 release
2019-07-08 11:09:24 +02:00
Oleksii Kriuchykhin
9d926dc956 Refactor TinyMce assets, user avatars, zip files [SCI-3539] 2019-07-05 16:56:05 +02:00
Jure Grabnar
6e1d4c205c Add tests for page_id for search service 2019-07-04 16:02:29 +02:00
Jure Grabnar
9f42f6f24b Fix normalizer tests caused by pagination 2019-07-04 15:45:09 +02:00
Jure Grabnar
20134c9f8a
Features/protocolsio integration (#1893)
Features/protocolsio integration
2019-07-03 17:32:20 +02:00
Jure Grabnar
8866d98512 Fix empty file name on protocols.io
Closes SCI-3650
2019-07-03 16:11:51 +02:00
Miha Mencin
b709c0ec3c fix the normalized protocol fixture 2019-07-03 11:49:01 +02:00
Anton Ignatov
c9ae9f056e Merge branch 'okriuchykhin-ok_SCI_3539' into features/marvinjs-integration 2019-07-01 10:44:29 +02:00
Anton Ignatov
390002f40f Merge branch 'ok_SCI_3539' of https://github.com/okriuchykhin/scinote-web into okriuchykhin-ok_SCI_3539 2019-07-01 10:12:26 +02:00
Anton Ignatov
6be227b2d3 Merge branch 'master' of https://github.com/biosistemika/scinote-web into features/marvinjs-integration 2019-06-28 10:47:38 +02:00
Jure Grabnar
9be4fc2470 Fix tests 2019-06-28 02:19:06 +02:00
Urban Rotnik
9cb4454537 New implementation for attachments creation 2019-06-27 17:02:06 +02:00
Jure Grabnar
82fb8ebd2e
Implement protocols.io error handling (#1869)
Implement protocols.io error handling
2019-06-27 16:35:55 +02:00
Jure Grabnar
7fc1243e48 Add ProtocolNormalizer errors tests 2019-06-27 14:59:03 +02:00
Jure Grabnar
06b8d1fda7 Update ApiClient tests
Closes SCI-3434
2019-06-27 14:54:19 +02:00
Mojca Lorber
9fd83d54a0 Put network error handeling into api and refactor errors 2019-06-26 14:04:03 +02:00
aignatov-bio
83bc9eb22f
Merge pull request #1839 from aignatov-bio/ai-sci-3369-activity-for-edited-image-annotation
Adding new activities for image editing [SCI-3369]
2019-06-24 10:31:39 +02:00
Anton Ignatov
7e5c39d3e4 Merge branch 'master' into features/marvinjs-integration 2019-06-21 14:51:45 +02:00
Anton Ignatov
6530786f17 Fix tests 2019-06-20 16:05:19 +02:00
aignatov-bio
a00ec02983
Add tests for edit WOPI activities [SCI-3238] (#1822)
* Add tests for edit wopi activities
2019-06-20 09:31:29 +02:00
Anton Ignatov
6f1f6e297c Fix tests 2019-06-19 15:40:27 +02:00
Urban Rotnik
bf6041e13d Update sanitization of html descriptions 2019-06-19 11:05:22 +02:00
Urban Rotnik
7e69375016 Drop header column and row when extract tables 2019-06-19 10:47:38 +02:00
Urban Rotnik
2a579f2240 Add Warnings, Before start and Guidelinese to protocol description 2019-06-19 09:02:42 +02:00
Mojca Lorber
ebcaa4b014 Implement protocols.io error handling for api client and normalizer 2019-06-18 14:01:57 +02:00
Urban Rotnik
c691ad80b5 Add fields to query params for ApiClient 2019-06-17 12:24:16 +02:00
Urban Rotnik
88d96c0938 Use service in controller 2019-06-17 12:24:15 +02:00
Urban Rotnik
7fad5fc594 Add search service and normalizer for list 2019-06-17 12:24:15 +02:00
Jure Grabnar
4f6397b5b9 Add form to external_sources#new action
Closes SCI-3532
2019-06-17 12:24:15 +02:00
Jure Grabnar
c8b8bcffdb Add external_protocols#show action 2019-06-17 12:24:14 +02:00
Jure Grabnar
f7c6f78925 Add external_protocols#index action 2019-06-17 12:24:14 +02:00
Jure Grabnar
2a61075156 Add ExternalProtocols#create action and tests 2019-06-17 12:24:14 +02:00
Jure Grabnar
9baa66c998 Refactor OnlineSources -> ExternalProtocols 2019-06-17 12:24:13 +02:00
Jure Grabnar
eb0d677a36 Refactor pio_protocol -> built_protocol 2019-06-17 12:24:13 +02:00
Jure Grabnar
94e7fe1e6c OnlineSourcesController skeleton and #new action tested 2019-06-17 12:24:13 +02:00
Urban Rotnik
0d43ecdfab Import protocol service after object is built 2019-06-17 12:24:11 +02:00
Jure Grabnar
eb275c4d12 Add tests for BuildProtocolService and fix bugs 2019-06-17 12:24:11 +02:00
Jure Grabnar
362b0cd45d Hound fixes 2019-06-17 12:24:11 +02:00
Jure Grabnar
640f6c1211 Fix tests after BuildProtocolFromClientService refactor
Closes SCI-3544
2019-06-17 12:24:11 +02:00
Jure Grabnar
1e8627c450 Refactor ImportProtocol service to BuildProtocolService
Closes SCI-3544
2019-06-17 12:24:10 +02:00
Urban Rotnik
92c24451d9 Moved normalized_single_protocol.json 2019-06-17 12:24:10 +02:00
Urban Rotnik
a15596a126 Add ImportProtocolService 2019-06-17 12:24:10 +02:00
Urban Rotnik
2bb4f558b7 View rendering simplified, small improvements 2019-06-17 12:24:09 +02:00
Urban Rotnik
807104035c Add StepBuilder, TableBuilder, AssetBuilder for PIO, normalized updated 2019-06-17 12:24:09 +02:00
Urban Rotnik
6a4deb0201 Add ProtocolIntermediateObject 2019-06-17 12:24:09 +02:00
Urban Rotnik
aadf2eecb4 Basic data normalizer for ProtocolIO 2019-06-17 12:24:08 +02:00
Urban Rotnik
ec49388283 Add protocol base normalizer class 2019-06-17 12:24:08 +02:00
Jure Grabnar
c1cee07a63 Extract API client constants to constants.rb 2019-06-17 12:24:08 +02:00
Jure Grabnar
5685709f48 Implement API client for protocols.io
Closes SCI-3357
2019-06-17 12:24:07 +02:00
Anton Ignatov
f480c0eb8d Adding new activtiies for image editing 2019-06-14 16:15:30 +02:00
Oleksii Kriuchykhin
109793c7fb Upgrade to Rails 5.2.3 and add ActiveStorage [SCI-3539] 2019-06-13 12:10:44 +02:00
Urban Rotnik
bbe0062bfd Small fixes for factories 2019-06-10 12:24:05 +02:00
Urban Rotnik
1bae169ab0 Delete duplicaed user_project factory 2019-06-10 12:24:05 +02:00
Urban Rotnik
965b7eb58b Add missing factories 2019-06-10 12:24:04 +02:00
Urban Rotnik
f19eeba8dc Add factory valid check for User's associations 2019-06-10 12:24:04 +02:00
Urban Rotnik
ba340f7bee Add valid factory check for Table, Tag, Team 2019-06-10 12:24:03 +02:00
Urban Rotnik
9348886fb1 Minior changes in SystemNotifications tests 2019-06-10 12:24:03 +02:00
Urban Rotnik
15cbd8864c Add valid factory check to Steps models 2019-06-10 12:24:03 +02:00
Urban Rotnik
1e60102a7d Add valid factory check for Sample(s) models 2019-06-10 12:24:02 +02:00
Urban Rotnik
c66aa29227 Add valid factory check for Result(s) models 2019-06-10 12:24:02 +02:00
Urban Rotnik
3adf2bb736 Add factories and validation tests for repositories and related models
Repositories, cells, columns, values (date, text, asset, list), rows, items
2019-06-10 12:24:02 +02:00
Urban Rotnik
a7558d83be Add valid factory check for Project, MyModules, notification, protocol 2019-06-10 12:24:01 +02:00
Urban Rotnik
3348b81b14 Checklist, checklist_item, activity, experiment spec and factories updated 2019-06-10 12:24:01 +02:00
Urban Rotnik
6321c0f5c0 Assets spec and factories updated 2019-06-10 12:24:01 +02:00
Alex Kriuchykhin
36255f82ed
Merge pull request #1817 from okriuchykhin/ok_SCI_3522
Add system notifications service to health check endpoint [SCI-3522]
2019-06-04 14:41:43 +02:00
Oleksii Kriuchykhin
2842ea381e Fix tests for health check endpoint [SCI-3522] 2019-05-31 16:48:10 +02:00
Luka Murn
98234287f5 Fix failing permission_eval_spec test 2019-05-31 10:33:55 +02:00
Anton Ignatov
c9a29b12ba Merge branch 'master' into features/marvinjs-integration 2019-05-31 10:27:14 +02:00
Oleksii Kriuchykhin
0fd7a4e8f1 Fix failing tests [SCI-3412] 2019-05-27 17:32:21 +02:00
Anton Ignatov
259b75a6ba Merge branch 'master' into features/marvinjs-integration 2019-05-16 09:28:48 +02:00
Anton Ignatov
652fba0e23 Merge branch 'master-with-note-section' 2019-05-13 11:08:11 +02:00
Alex Kriuchykhin
2a7f70929a
Merge pull request #1717 from okriuchykhin/ok_SCI_3368
Improve clean up of Export All files [SCI-3368]
2019-05-09 13:37:56 +02:00
Anton Ignatov
dcf94e78e1 Merge branch 'master-with-note-section' into feature/marvinjs-integration 2019-05-08 14:03:41 +02:00
Urban Rotnik
62bc0520e9 Update method last_sync_timestamp from Last to First user 2019-05-08 08:38:11 +02:00
Urban Rotnik
2364c2653f Add bulk insert for UserSystemNotifications, New service for sending emails 2019-05-08 08:38:10 +02:00
Oleksii Kriuchykhin
84712de9ca Fix failing tests [SCI-3368] 2019-05-07 16:42:06 +02:00
Anton Ignatov
d36160386f Merge branch 'master' into master-with-note-section 2019-05-07 13:26:55 +02:00
Anton Ignatov
88e67a16c2 Merge branch 'master-with-note-section' into feature/marvinjs-integration 2019-05-02 16:16:03 +02:00
Oleksii Kriuchykhin
4522e6bf06 Update Ruby to 2.5.5, Rails to 5.1.7 and Devise to 4.6.2 [SCI-3401] 2019-04-30 17:04:48 +02:00
Anton Ignatov
7c55fcf0cf Merge branch 'master' into master-with-note-section 2019-04-30 12:07:59 +02:00
aignatov-bio
687b53feb1
Add new tag activtiies [SCI-3341] (#1712)
* Add new tag activtiies
2019-04-30 10:23:09 +02:00
Anton Ignatov
c1214c84f5 Fix factories markup 2019-04-28 19:52:30 +02:00
Anton Ignatov
f80d881847 Fix markup 2019-04-28 19:11:41 +02:00
Anton Ignatov
fe620c4a63 Add marvin model and controller 2019-04-26 22:59:38 +02:00
Mojca Lorber
9e04eb8ea1 Fixes upon Urbans request 2019-04-26 11:34:53 +02:00
Oleksii Kriuchykhin
260782e233 Update tests for new rich text enabled fileds [SCI-3264] 2019-04-24 13:45:29 +02:00
Oleksii Kriuchykhin
7c91b4a255 Merge remote-tracking branch 'scinote/master-with-note-section' into ok_SCI_3266 2019-04-23 17:01:13 +02:00
Oleksii Kriuchykhin
c7a707f9db Fix task clonning with TinyMCE images [SCI-3266] 2019-04-23 15:16:40 +02:00
Anton Ignatov
aa2dab2014 Merge branch 'features/note-section' into master-with-note-section 2019-04-23 10:31:37 +02:00
aignatov-bio
6ac620feb3
Migration for old tinymce assets [SCI-3176] (#1663)
* adding rake task

* Addign test for update images

* Adding tests for tiny mce model
2019-04-19 15:24:54 +02:00
aignatov-bio
a75c4c2f91
Update Result API for new tiny mce image format (#1674) 2019-04-19 14:44:16 +02:00
Mojca Lorber
208b7c9939 Fix hound 2019-04-19 13:56:21 +02:00
Mojca Lorber
36e7cfe5c4 Change failing tests 2019-04-19 13:37:52 +02:00
Mojca Lorber
b00cf07684 Add activity for importing inventory items 2019-04-18 15:18:10 +02:00
Oleksii Kriuchykhin
96cf7b4de2 Fix failing tests [SCI-3177] 2019-04-17 12:58:47 +02:00
Urban Rotnik
22af36dd2d Fix for exports_left, fix for some edge cases 2019-04-16 09:59:02 +02:00
Urban Rotnik
caccf8d9f0 Reset counter for export in last 24 hours
Fix for check if user has avaiable exports, bit refactored increas_counter method.
2019-04-10 10:56:33 +02:00
Anton Ignatov
94efd2e649 Fix tests 2019-04-02 16:04:50 +02:00
Urban Rotnik
86ddbc68b6 fixup! Show date actual value without link 2019-04-02 14:21:06 +02:00
Anton Ignatov
c9f9523210 Remove src when save description and rename token tag 2019-04-02 13:41:32 +02:00
Urban Rotnik
8eaeeee9f8 Show date actual value without link 2019-04-02 13:15:34 +02:00
aignatov-bio
e6102c72c7
Adding missed activities [SCI-3253] (#1614)
* Adding missed activties

* Adding test for activities
2019-04-02 11:50:37 +02:00
Urban Rotnik
b91f08fe99 Add activity for copying Inventory and Invetory item 2019-04-01 15:40:00 +02:00
Jure Grabnar
e165459ef5
Merge pull request #1574 from jbargu/jg_sci_3149_3163
Valid smart annotation links of smart annotation imported within protocol [SCI-3149, 3163]
2019-04-01 14:32:54 +02:00
Jure Grabnar
ebc2d8ee75 Fix experiment_spec test using the old variable
Closes SCI-3244
2019-04-01 12:50:35 +02:00
Mojca Lorber
f06358b2ae Implement missing tests for global activities (task and protocol activities) 2019-03-27 11:24:44 +01:00
Miha Mencin
4a87216a3d
Merge branch 'master' into features/global-activities 2019-03-25 14:35:24 +01:00
Jure Grabnar
f3e6a35121 Update PermissionEval tests with team check 2019-03-21 10:45:21 +01:00
Mojca Lorber
c55e314ed5 Refactor upon the review requests 2019-03-20 21:34:47 +01:00
Anton Ignatov
5d6f009ee8 fix error for delay deleting 2019-03-20 15:20:31 +01:00
Anton Ignatov
55c93922ea markup fixes 2019-03-20 14:46:54 +01:00
Anton Ignatov
07c2819163 refactoring tinymce image uploading 2019-03-20 14:46:54 +01:00
Jure Grabnar
5de51f9c58 Prevent smart annotations accessing other teams when importing protocol
Closes SCI-3163
2019-03-20 12:58:22 +01:00
Mojca Lorber
4f9814b884 Merge branch 'features/global-activities' of github.com:biosistemika/scinote-web into ml-sci-3021 2019-03-20 11:03:00 +01:00
Mojca Lorber
7757096693 Results activities refactoring 2019-03-19 15:33:57 +01:00
Mojca Lorber
1418abc8d7 Reports activities refactoring 2019-03-19 15:33:57 +01:00
Mojca Lorber
d1e38e5bc9 Project activities refactoring 2019-03-19 15:33:57 +01:00
Mojca Lorber
70eebca5ee experiment activities refactoring 2019-03-19 15:33:57 +01:00
Urban Rotnik
fe35c805b7 Add model breadcrumbs, update activities_helper 2019-03-19 14:01:06 +01:00
Urban Rotnik
c65d1af18d Fix failing tests 2019-03-13 09:53:34 +01:00
Urban Rotnik
b6a8556601 Add activities for exporting Projects, Inventory items 2019-03-12 09:15:06 +01:00
Urban Rotnik
e7b57aa4f7 Add creating activities for Team actions 2019-03-12 09:15:06 +01:00
Urban Rotnik
3f18166320 Add Task and TaskTags activities 2019-03-12 09:15:06 +01:00
Urban Rotnik
7a05e817ef Add new Protocol steps activities 2019-03-12 09:15:06 +01:00
Urban Rotnik
b33e95e18a New Protocols actions logging 2019-03-12 09:14:53 +01:00
Urban Rotnik
cfe2888bea Repository columns actions loggin 2019-03-12 09:11:00 +01:00
Urban Rotnik
32422c00eb RepositoryRows actions loggin 2019-03-12 09:11:00 +01:00
Urban Rotnik
2a7bbac733 Repository actions logging 2019-03-12 09:11:00 +01:00
Urban Rotnik
976831e7d3 Edit and Archive experiment activity logging 2019-03-12 09:11:00 +01:00
Urban Rotnik
b8e84b5685 Add logic for saving message items values and types 2019-03-11 08:37:22 +01:00
Urban Rotnik
9ed3313f0f Create project activity refactored 2019-03-11 08:36:15 +01:00
Urban Rotnik
117944117b Add service for activity creation 2019-03-11 08:36:15 +01:00
Miha Mencin
51b3aea49a added uniquness validator and index on user_projects and user_teams relations
finxing typo, fixied failing test

fixing mistakenly commited file

fixing schema to include bigint migration
2019-02-27 15:09:47 +01:00
Urban Rotnik
5a123d26ac Activity model update 2019-02-26 07:15:05 +01:00
Urban Rotnik
3ad6cee766 Fix tests, remove nullable field 2019-02-25 16:50:38 +01:00
Urban Rotnik
5b5c6c7122 Changes to Activity model 2019-02-25 16:49:55 +01:00
Miha Mencin
bcd0b433b6
Merge pull request #1514 from biosistemika/features/system-notifications
Features/system notifications
2019-02-21 16:38:58 +01:00
aignatov-bio
5f78d83f9c
Changing status from unread to read system notification is not correct one [SCI-3077 and SCI-3075] (#1513)
* fix dropdown apperance

* Remove search and fix duplicate bug

* Fix specs for new method
2019-02-21 16:15:13 +01:00
aignatov-bio
5fdba554d2
Merge pull request #1510 from biosistemika/features/system-notifications
Features/system notifications
2019-02-20 17:22:57 +01:00
Urban Rotnik
82ea31e275 Add validation limits for system notification fields 2019-02-20 16:05:15 +01:00
Urban Rotnik
7b6c6c414d Merge branch 'master' into features/templates 2019-02-19 14:46:15 +01:00
aignatov-bio
fcdb4e7a92
Merge pull request #1500 from biosistemika/features/system-notifications
Features/system notifications
2019-02-19 13:51:18 +01:00
Urban Rotnik
f7c7335bf0 Change test to pass on Travis 2019-02-19 11:23:01 +01:00
Urban Rotnik
f63eaaefe7 Add user_system_notification records when syncing notifications, update email sending 2019-02-19 11:22:58 +01:00
Urban Rotnik
29d77ca81d Add system_notification sending email feature 2019-02-19 11:20:25 +01:00
aignatov-bio
8e905b67b2
System notification navbar menu drop down [SCI 2955] (#1498)
* Add dropdown menu and icon for system notifications
* Finish system notification dropdown menu and add tests
2019-02-19 11:08:59 +01:00
Alex Kriuchykhin
185e3b4832
Merge pull request #1495 from okriuchykhin/ok_SCI_3039
Create templates project when syncing templates if team doesn't have it [SCI-3039]
2019-02-14 17:40:01 +01:00
Urban Rotnik
5b55860dea Add scheduler 2019-02-13 15:48:15 +01:00
Urban Rotnik
9f3187abdf Add service for sync system notifications 2019-02-13 15:48:15 +01:00
Oleksii Kriuchykhin
da30d187a6 Create templates project when syncing templates if team doesn't have it [SCI-3039] 2019-02-13 15:17:33 +01:00
mlorb
71e4cc4dbd
Merge branch 'master' into ml-sci-2940 2019-02-13 14:35:03 +01:00