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1246 commits

Author SHA1 Message Date
Luka Murn
24299ef4c0 Fix GET /tasks/:task_id/tags, GET /tasks/:task_id/tags/:id endpts 2018-10-07 11:10:41 +02:00
Luka Murn
98544f00e8 Fix GET /tasks/:task_id/users, GET /tasks/:task_id/users/1 endpts 2018-10-07 10:20:01 +02:00
Luka Murn
94e80edc9b Minor variable rename in task_groups_controller.rb 2018-10-07 10:16:00 +02:00
Luka Murn
f56e5b1e5a Update GET /task/:task_id/items, GET /task/:task_id/items/:id endpts 2018-10-07 10:07:37 +02:00
Luka Murn
0de3c7eb4e Update GET /tasks, GET /tasks/:id endpoints, refactor routes.rb 2018-10-07 09:45:24 +02:00
Luka Murn
0643ba216e Fix GET /connections, /connections/:id endpoints 2018-10-07 00:53:39 +02:00
Luka Murn
c9a15db85f Fix GET /task_groups endpoints 2018-10-06 20:11:01 +02:00
Luka Murn
d235dd7807 Update GET /inventory_items, GET /inventory_items/:id endpoints 2018-10-06 18:37:40 +02:00
Luka Murn
9e78de6ef2 Update CREATE, PATCH, DELETE inventory_column endpoints 2018-10-06 17:11:59 +02:00
Luka Murn
6625b4019e Update GET /inventory_columns, GET /inventory_columns/:id endpts 2018-10-06 13:47:41 +02:00
Luka Murn
eaa8a627a8 Update GET /inventories, GET /inventories/:inventory_id endpoints 2018-10-06 12:39:44 +02:00
Luka Murn
6faaff550b Update GET /teams, GET teams/:team_id endpoints slightly 2018-10-06 12:18:57 +02:00
Jure Grabnar
d7c875135e
Merge pull request #1304 from jbargu/jg_zipfile_structure 
Create zipfile structure for export all, implement inventory CSV for export [SCI-2640] [SCI-2642] [SCI-2643] [SCI-2644]
 2018-10-05 15:36:56 +02:00
Oleksii Kriuchykhin
0c452f519d Add CRUD endpoints for inventory cells [SCI-2765] 2018-10-05 00:18:42 +02:00
Oleksii Kriuchykhin
363c1e4a34 Add endpoints for managing inventory list items [SCI-2741] 2018-10-03 13:54:52 +02:00
Oleksii Kriuchykhin
492a5de19e Add Projects view - list/table view [SCI-2731] 2018-10-01 15:39:42 +02:00
Oleksii Kriuchykhin
2508394924 Refactor Projects view - cards view [SCI-2730] 2018-09-27 10:43:44 +02:00
Zanz2
2e0c40ed45 fixed merge 2018-09-26 12:20:13 +02:00
Zanz2
c8ed808920 merged with core-api 2018-09-26 12:17:49 +02:00
Zanz2
1a512698e8
Merge pull request #1286 from Zanz2/zz_search_page_update_bug_sci2684_v2 
( better solution ) Search page results from different teams than active not switching active team on click [SCI-2684]
 2018-09-26 12:04:09 +02:00
Alex Kriuchykhin
112343e65d
Merge pull request #1311 from okriuchykhin/ok_SCI_2738 
Improve delayed jobs for TempFile deletion and Asset text extraction [SCI-2738]
 2018-09-25 11:49:19 +02:00
Oleksii Kriuchykhin
e06684b7cf Few fixes after review [SCI-2718] 2018-09-24 18:10:37 +02:00
Oleksii Kriuchykhin
ab3aeac26b Merge latest core-api branch [SCI-2718] 2018-09-24 16:49:27 +02:00
Luka Murn
2396149c57
Merge pull request #1273 from Zanz2/zz_tooltip_settings_enable_sci2663 
Added toggle checkbox for tooltips help in prefferences [SCI-2663]
 2018-09-24 16:23:28 +02:00
Zanz2
8699761389
Merge pull request #1297 from Zanz2/zz_tasks_api_task_2667 
Created read endpoint for tasks, results and related data [SCI-2667] [SCI-2669]
 2018-09-24 15:31:47 +02:00
Zanz2
e5b7d68031 this should fix travis ci 2018-09-24 13:33:44 +02:00
Zanz2
1e8442e22e fixed pull request review, forgot some small thing 2018-09-24 12:50:11 +02:00
Zanz2
1a9890ee0f fixed pull request review 2018-09-24 12:48:53 +02:00
Alex Kriuchykhin
b38e85c282
Merge pull request #1301 from okriuchykhin/ok_SCI_2693_v2 
Fix CREATE inventory endpoint [SCI-2693]
 2018-09-24 10:51:13 +02:00
Jure Grabnar
872a1211bb Format according to Houndbot #3 2018-09-23 18:58:56 +02:00
Jure Grabnar
d6f7ec2604 Format according to houndbot #2 2018-09-23 18:53:43 +02:00
Jure Grabnar
869967361c Fix according to Houndbot 2018-09-23 18:48:44 +02:00
Jure Grabnar
59169f882d Add permission check for every project 2018-09-23 14:34:21 +02:00
Jure Grabnar
90b220ddda Format according to Houndbot #4 2018-09-23 12:06:06 +02:00
Oleksii Kriuchykhin
7f7ece2be0 Improve delayed jobs for TempFile deletion and Asset text extraction [SCI-2738] 2018-09-21 17:46:18 +02:00
Oleksii Kriuchykhin
84428b37c2 Add project view JSON endpoints [SCI-2728] 2018-09-21 10:39:20 +02:00
Luka Murn
5d6881bae1
Merge pull request #1309 from biosistemika/release-1.14.5 
Merge release-1.14.5 into master
 2018-09-20 08:53:51 +02:00
Oleksii Kriuchykhin
872a48082a Remove Samples from search controller [SCI-2739] 2018-09-18 15:03:19 +02:00
Jure Grabnar
449aa12070 Refactor TeamZipExport code (move it into special file) 2018-09-16 20:28:26 +02:00
Oleksii Kriuchykhin
49e788a9ad Mergre latest core-api [SCI-2515] 2018-09-14 10:24:05 +02:00
Oleksii Kriuchykhin
acc00ff3b9 Add CREATE Result endpoint: Create Text result [SCI-2718] 2018-09-13 13:38:11 +02:00
Zanz2
8ac1445ace Fixed hound 2018-09-13 11:37:07 +02:00
Zanz2
7f704c07e3 Created base endpoints for projects and related models 2018-09-13 11:37:07 +02:00
Zanz2
dace81f724 created base projects endpoint 2018-09-13 11:37:07 +02:00
Zanz2
bd49ea56c5 Added results endpoint 2018-09-13 11:16:34 +02:00
Zanz2
426bd129cc Added task inputs and outputs functionality 2018-09-13 11:14:22 +02:00
Oleksii Kriuchykhin
9d9a5d07d8 Fix CREATE inventory endpoint [SCI-2693] 2018-09-13 11:08:58 +02:00
Zanz2
2519a010f6 Created new controllers and serializers for nested task related attributes 2018-09-13 11:04:52 +02:00
Zanz2
765ee25853
Merge pull request #1292 from Zanz2/zz_experiments_api_task_2666 
Created API endpoints for experiments and related data [SCI-2666]
 2018-09-13 10:49:49 +02:00
Zanz2
1159ce519c Review changes 2018-09-13 09:25:16 +02:00
Luka Murn
0b68a670c2 Fix the inventory_columns_controller#create action 
Based on unit tests, fix the create inventory columns endpoint
to work as intended. Also add another unit test case.
 2018-09-12 13:44:10 +02:00
Zanz2
4c2c92445c fixed oversight, added paging to connections 2018-09-11 13:07:28 +02:00
Zanz2
7cb50145a0
Merge pull request #1275 from Zanz2/zz_adding_removing_table_sci2621 
Fixed table add and remove crash [SCI-2621]
 2018-09-11 09:37:07 +02:00
Zanz2
e64aee5db0 Completed the functionality for experiments and related endpoints 2018-09-07 11:58:02 +02:00
Zanz2
1589cfb1b2 saving work 2018-09-06 15:38:48 +02:00
Luka Murn
586a442abc Refactor the settings page, rename setting to tooltips_enabled 2018-09-05 16:36:32 +02:00
Zanz2
f9d55f913a trying to fix display of my modules data 2018-09-05 12:54:08 +02:00
Zanz2
5ada21725f inital experiments api functionality 2018-09-05 09:55:04 +02:00
Zanz2
1bed2c2a3c Partially fixed according to pull request review, added comments to code review 2018-08-31 12:11:51 +02:00
Zanz2
d4aa5e60a2 Merge branch 'master' of https://github.com/biosistemika/scinote-web into zz_tooltip_settings_enable_sci2663 
Merging to update db, so i dont have to docker-clean my whole environment 2 times to switch between this branch and up to date ones
 2018-08-31 11:42:26 +02:00
Zanz2
728b1fe491 Reverted deleted lines by accident 2018-08-28 14:51:05 +02:00
Zanz2
b26530a02f Found a new, and more elegant fix inside controller with Luka 2018-08-28 14:48:23 +02:00
Alex Kriuchykhin
18dfeb537b
Merge pull request #1269 from okriuchykhin/ok_SCI_2604 
Improve health check endpoint [SCI-2604]
 2018-08-24 16:55:47 +02:00
Oleksii Kriuchykhin
4d49671ae8 Add CRUD for inventories and columns [SCI-2690][SCI-2691][SCI-2692][SCI-2693][SCI-2694][SCI-2695] 2018-08-24 16:41:26 +02:00
Oleksii Kriuchykhin
c8efa4bffc Add SHOW, UPDATE and DELETE inventory item endpoints [SCI-2688][SCI-2689] 2018-08-24 15:48:49 +02:00
Oleksii Kriuchykhin
5488fc66fc Refactor JSON API mime type registration [SCI-2687] 2018-08-24 15:37:23 +02:00
Oleksii Kriuchykhin
490376513b Add inventory item CREATE endpoint [SCI-2687] 2018-08-24 15:36:19 +02:00
Oleksii Kriuchykhin
c8abb3d9b8 Add user_identities CRUD endpoints, make API V1 togglable [SCI-2664][SCI-2686] 2018-08-24 15:27:59 +02:00
Alex Kriuchykhin
eb2d3e7951
Merge pull request #1276 from okriuchykhin/ok_SCI_2613 
Add READ user endpoint [SCI-2613]
 2018-08-24 15:23:05 +02:00
Alex Kriuchykhin
427ab5fb41
Merge pull request #1264 from okriuchykhin/ok_SCI_2615 
Add GET inventory columns API endpoint [SCI-2615]
 2018-08-24 15:22:35 +02:00
Alex Kriuchykhin
1832c0e806
Merge pull request #1262 from okriuchykhin/ok_SCI_2614 
Add read inventories and inventory items endpoints [SCI-2614][SCI-2616][SCI-2617]
 2018-08-24 15:22:13 +02:00
Alex Kriuchykhin
0ca9972905
Merge pull request #1271 from okriuchykhin/ok_SCI_2628 
Fix error on activities page when user doesn't have any [SCI-2628]
 2018-08-22 14:21:18 +02:00
Jure Grabnar
295c6a9432 Add export all functionality (basic skeleton) 2018-08-21 21:07:45 +02:00
Luka Murn
92eab25a07
Merge pull request #1261 from mlorb/ml-sci-2634 
fix editing of inventory items of hidden columns [SCI-2634]
 2018-08-21 16:59:37 +02:00
Luka Murn
92a4a54ae7 Slighty change the parameter parsing of removed file cells 2018-08-21 16:46:47 +02:00
Oleksii Kriuchykhin
a8013118d4 Add READ user endpoint [SCI-2613] 2018-08-21 13:56:14 +02:00
Zanz2
ab3b15e13e Found the bug and fixed it 2018-08-21 13:26:16 +02:00
Zanz2
817d09ad5f fixed hound 2018-08-21 11:29:38 +02:00
Zanz2
beb1d02914 Made fiew part for toggler, now debugging why checkbox doenst render properly and why it defaults to false always 2018-08-20 15:57:09 +02:00
Oleksii Kriuchykhin
3a5238f6f3 Fix error on activities page when user doesn't have any [SCI-2628] 2018-08-20 14:26:42 +02:00
Oleksii Kriuchykhin
1a57289009 Improve health check endpoint [SCI-2604] 2018-08-17 16:13:21 +02:00
Oleksii Kriuchykhin
ecde634a2c Add OAuth2 provider [SCI-2515] 2018-08-17 13:17:59 +02:00
Oleksii Kriuchykhin
ef7e0ac489 Add GET inventory columns API endpoint [SCI-2615] 2018-08-08 17:31:37 +02:00
Oleksii Kriuchykhin
4df9a4c9ca Fix code style warnings [SCI-2614][SCI-2616][SCI-2617] 2018-08-08 17:01:49 +02:00
Oleksii Kriuchykhin
8d11e03d47 Add read inventories and inventory items endpoints [SCI-2614][SCI-2616][SCI-2617] 2018-08-08 17:01:49 +02:00
Alex Kriuchykhin
6004f8411b
Merge pull request #1260 from okriuchykhin/ok_SCI_2611 
Add GET teams and team API endpoints [SCI-2611][SCI-2612]
 2018-08-08 16:59:42 +02:00
mlorb
f52ccfd606 fix editing of inventory items of hidden columns 2018-08-07 11:47:26 +02:00
okriuchykhin
29f0f2afeb
Merge pull request #1257 from okriuchykhin/ok_SCI_2609 
Refactor tasks tree API endpoint [SCI-2609]
 2018-08-02 17:10:55 +02:00
okriuchykhin
dd9090efef
Merge pull request #1253 from okriuchykhin/ok_SCI_2608 
Adds API authentication with Azure AD [SCI-2608]
 2018-08-02 11:28:18 +02:00
Oleksii Kriuchykhin
22e12d8fc3 Add GET teams and team API endpoints [SCI-2611][SCI-2612] 2018-07-31 13:40:27 +02:00
Oleksii Kriuchykhin
26b0bd9e11 Refactor tasks tree API endpoint [SCI-2609] 2018-07-30 14:48:11 +02:00
Oleksii Kriuchykhin
0e372af729 Adds API authentication with Azure AD [SCI-2608] 2018-07-24 14:21:33 +02:00
zmagod
29e0ecbc89 move FirstTimeDataGenerator helper from applictaion controller 2018-07-11 11:19:39 +02:00
zmagod
8b86891177 fixes file destroy button [fixes SCI-2546] 2018-07-03 15:25:37 +02:00
zmagod
28bac14667 first working version of the edit form object 2018-07-03 12:57:39 +02:00
ZmagoD
23de3abd61 Fixes repository items edit action, adds additional event listener for file upload 2018-06-29 16:59:26 +02:00
zmagod
db1944cc90 move maximum file size limit to an ENV variable [fixes SCI-2415] 2018-06-19 14:15:14 +02:00
zmagod
6a6ff534c0 fixes import flash message [fixes SCI-2398] 2018-06-15 11:12:11 +02:00
zmagod
f8ac083d39 adds an additional check if some other user has added/removed repository columns [fixes SCI-2408] 2018-06-12 15:28:03 +02:00
Zmago Devetak
6ba5c587f7
Merge pull request #1189 from ZmagoD/zd_SCI_2211 
add data-hook, refactor add user to project modal to support addons
 2018-06-08 15:23:26 +02:00
zmagod
f769215468 fixes assign items flash message [fixes SCI-2487] 2018-06-08 10:02:57 +02:00
Zmago Devetak
fad67d7730
Merge pull request #1185 from ZmagoD/zd_SCI_2468 
Limits the max. amount of rows when importing into inventories [fixes…
 2018-06-04 16:29:33 +02:00
zmagod
84170f6de0 add data-hook, refactor add user to project modal to support addons 2018-06-01 16:13:22 +02:00
Oleksii Kriuchykhin
58d8414f92 Code fixes for sidebar [SCI-2478] 2018-06-01 15:05:12 +02:00
Oleksii Kriuchykhin
2ddc0fb561 Improve sidebar rendering performance [SCI-2478] 2018-06-01 13:49:02 +02:00
zmagod
9abf50e7c5 Limits the max. amount of rows when importing into inventories [fixes SCI-2468] 2018-05-31 10:45:31 +02:00
Oleksii Kriuchykhin
6cf9149baa Add user id tracking when discarding repository [SCI-2462] 2018-05-29 15:33:02 +02:00
zmagod
89046e9787 fixes items assign flash message [fixes SCI-2395] 2018-05-29 12:54:41 +02:00
okriuchykhin
6deaa7235b
Merge pull request #1136 from okriuchykhin/ok_SCI_2396 
Handle situation with smart annotations and zero inventories [SCI-2396]
 2018-05-28 17:23:29 +02:00
Zmago Devetak
147e74b4a5
Merge pull request #1164 from ZmagoD/zd_SCI_2448 
adds discard gem, move deletion of repositories in a rake task to run…
 2018-05-28 15:04:54 +02:00
Zmago Devetak
ad5114090f
Merge pull request #1165 from ZmagoD/zd_SCI_2433 
fixes tast description/due-date modal [fixes SCI-2433]
 2018-05-28 13:10:15 +02:00
okriuchykhin
0e6c89c3de
Merge pull request #1166 from okriuchykhin/ok_SCI_2342 
Fix WOPI controller to support repositories [SCI-2342]
 2018-05-28 13:07:17 +02:00
zmagod
c683cfdbd7 triggers the delayed job in the controller action, fixes smart annotations 2018-05-25 11:41:43 +02:00
Oleksii Kriuchykhin
46d6accf78 Fix search in repositories [SCI-2428] 2018-05-24 17:14:40 +02:00
Oleksii Kriuchykhin
b019ab8f61 Fix WOPI controller to support repositories [SCI-2342] 2018-05-24 16:51:25 +02:00
zmagod
10351bbf83 fixes tast description/due-date modal [fixes SCI-2433] 2018-05-24 16:44:10 +02:00
zmagod
1f8db7bc49 Merge branch 'ux-release-1' of https://github.com/biosistemika/scinote-web into zd_SCI_2340 2018-05-24 15:00:59 +02:00
okriuchykhin
7b08529e39
Merge pull request #1156 from okriuchykhin/ok_SCI_2342 
Enable editing office online files in inventories [SCI-2342]
 2018-05-23 12:59:12 +02:00
Luka Murn
31a1641b42
Merge pull request #1155 from Ducz0r/lm-sci-2436-fix 
Update new repository row code so file columns work again [SCI-2436]
 2018-05-22 09:27:32 +02:00
Oleksii Kriuchykhin
5c41527b92 Enable editing office online files in inventories [SCI-2342] 2018-05-21 15:48:48 +02:00
Luka Murn
6135081a71 Update new repository row code so file columns work again 
Also fix backend code a bit (so update & create of repository rows
are more similar in their behavior), and fix line in JS:
_initSelectPicker() was called a reduntant amount of times when
editing repository row.

Closes SCI-2436.
 2018-05-21 14:46:30 +02:00
zmagod
ba2aafae39 fix access to public reports [fixes SCI-2340] 2018-05-21 14:45:18 +02:00
zmagod
5514683f96 shorten project name [fixes SCI-2344] 2018-05-18 14:12:12 +02:00
zmagod
38b0cb742c removes empty space 2018-05-17 15:21:45 +02:00
zmagod
e019767e90 refactor save_pdf_to_inventory_item service 2018-05-17 13:17:19 +02:00
zmagod
b125863baf Merge branch 'ux-release-1' of https://github.com/biosistemika/scinote-web into zd_SCI_2371 2018-05-17 11:25:33 +02:00
zmagod
ca0c8cbb71 fixes typos, fixes pdf rendering 2018-05-17 11:21:34 +02:00
Zmago Devetak
9d2303c777
Merge pull request #1115 from ZmagoD/zd_SCI_2321 
fixes images preview in repository/library [fixes SCI-2321]
 2018-05-16 12:05:33 +02:00
okriuchykhin
19ed711ce2
Merge pull request #1142 from okriuchykhin/ok_SCI_2411 
Fix pagination in global search inside repositories [SCI-2411]
 2018-05-16 10:19:05 +02:00
okriuchykhin
3e2b455d2c
Merge pull request #1139 from okriuchykhin/ok_SCI_2385 
Fix task resore permissions [SCI-2385]
 2018-05-16 10:17:51 +02:00
zmagod
4573655ec8 adds save PDF report to inventory feature [fixes SCI-2371] 2018-05-16 09:31:19 +02:00
Oleksii Kriuchykhin
0ca0884937 Fix pagination in global search inside repositories [SCI-2411] 2018-05-15 17:48:48 +02:00
Oleksii Kriuchykhin
1d0536b064 Fix task resore permissions [SCI-2385] 2018-05-15 11:51:53 +02:00
Oleksii Kriuchykhin
addf4cfe5e Handle situation with smart annotations and zero inventories [SCI-2396] 2018-05-14 15:34:23 +02:00
Oleksii Kriuchykhin
a92abc5995 Fix editing of inventory rows with existing files [SCI-2394] 2018-05-14 14:26:01 +02:00
okriuchykhin
3b4d9fe744
Merge pull request #1132 from okriuchykhin/ok_SCI_2301 
Move REPOSITORIES_LIMIT from constants to env variables [SCI-2301]
 2018-05-10 10:46:25 +02:00
zmagod
e5c3fb6af2 Merge branch 'ux-release-1' of https://github.com/biosistemika/scinote-web into zd_SCI_2321 2018-05-10 10:38:56 +02:00
Zmago Devetak
0a4deeaa35
Merge pull request #1112 from ZmagoD/zd_SCI_2261 
propagate assigned repository items in workflow [fixes SCI-2261]
 2018-05-10 09:57:49 +02:00
zmagod
0fe499d4a1 adds the update action to repository records last_modified_by field when downstreaming assigned records 2018-05-10 09:04:12 +02:00
Oleksii Kriuchykhin
8ec643c54b Move REPOSITORIES_LIMIT from constants to env variables [SCI-2301] 2018-05-09 18:03:16 +02:00
Zmago Devetak
a6275062b7
Merge pull request #1126 from ZmagoD/zd_SCI_2344 
adds new string truncation method [fixes SCI-2344]
 2018-05-07 16:30:12 +02:00
zmagod
fa30278153 change dropdown lenght 2018-05-03 16:25:59 +02:00
zmagod
0b721d86b1 adds new string truncation method [fixes SCI-2344] 2018-05-03 14:24:23 +02:00
mlorb
d2c0ae241e
Merge pull request #1121 from mlorb/ml-sci-2244 
Update buttons positions and wording throughout app [SCI-2244]
 2018-05-03 11:05:15 +02:00
zmagod
66b676b5ce Merge branch 'ux-release-1' of https://github.com/biosistemika/scinote-web into zd_SCI_2321 2018-04-26 17:04:36 +02:00
zmagod
0afe461962 fixes download link 2018-04-26 17:00:51 +02:00
zmagod
e9642cadad Merge branch 'ux-release-1' of https://github.com/biosistemika/scinote-web into zd_SCI_2304 2018-04-26 14:26:30 +02:00
zmagod
ca539cdce8 remove samples from search 2018-04-26 14:25:02 +02:00
zmagod
8dac887f10 Merge branch 'ux-release-1' of https://github.com/biosistemika/scinote-web into zd_SCI_2261 2018-04-26 14:18:41 +02:00
zmagod
24acd5c779 fixes per @duco 's request 2018-04-26 14:13:46 +02:00