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1786 commits

Author SHA1 Message Date
Oleksii Kriuchykhin
e67b17dd6f Optimize loading of project and experiment cards [SCI-6346] 2021-12-13 16:43:16 +01:00
Oleksii Kriuchykhin
8f1b201061 Improve activities loading speed [SCI-6345] 2021-12-09 19:28:27 +01:00
artoscinote
1c0a83a76e
Fix propagation and display of role on experiment role reset [SCI-6337] (#3725) 2021-12-07 11:42:14 +01:00
Oleksii Kriuchykhin
30031e2f07 Fix user removal from a team [SCI-6323] 2021-12-06 14:24:59 +01:00
Alex Kriuchykhin
245f0aedd7
Fix user removal from a team [SCI-6323] (#3718) 2021-12-03 16:26:19 +01:00
Oleksii Kriuchykhin
a8ad7ef826 Add models and controller for repository table filters [SCI-6209] 2021-12-02 14:25:23 +01:00
artoscinote
78ab094bf2
Implement public user grouping, deletion and updates to manually assigned [SCI-6228] (#3701) 
* Implement public user grouping, deletion and updates to manually assigned [SCI-6228]

* PR fixes [SCI-6228]

* Permission check improvement [SCI-6228]
 2021-12-01 16:23:24 +01:00
artoscinote
16b3ee3d94
Add non-cyclical validation to connections [SCI-6287] (#3702) 
* Add non-cyclical validation to connections [SCI-6287]

* Prevent theoretical infinite loop possiblity [SCI-6287]
 2021-12-01 11:14:01 +01:00
Martin Artnik
8a78b8376b Make all except public project assignments manual [SCI-6292] 2021-11-23 10:56:28 +01:00
Oleksii Kriuchykhin
a1c4d06e3e Add endpoint for fetching column data including connected items [SCI-6208] 2021-11-22 22:48:36 +01:00
Anton
a44dd8c915 Merge branch 'features/bmt-search' into features/repository-filters 2021-11-22 14:24:28 +01:00
aignatov-bio
06577e2f8b
Skip create assignments during team import [SCI-6280] (#3679) 
Co-authored-by: Anton <anton@scinote.net>
 2021-11-22 11:17:39 +01:00
Alex Kriuchykhin
ca5a81a85c
Add unique validation for user assignements [SCI-6279] (#3680) 2021-11-22 10:47:20 +01:00
artoscinote
a31bcd6eed
Fixed logging of project user role changes [SCI-6283] (#3687) 2021-11-22 09:50:14 +01:00
aignatov-bio
4b79ba209d
Remove visibility condition from projects scope [SCI-6188] (#3667) 
Co-authored-by: Anton <anton@scinote.net>
 2021-11-17 10:16:54 +01:00
Alex Kriuchykhin
8609b84131
Merge pull request #3669 from okriuchykhin/ok_SCI_6270 
Fix seeds to work with new UserRoles, fix Templates creation job [SCI-6270]
 2021-11-17 09:59:30 +01:00
artoscinote
0749fbdf7b
Regenerate user assignments when moving task workflow [SCI-6262] (#3668) 2021-11-16 11:10:15 +01:00
Oleksii Kriuchykhin
2e92500a73 Fix seeds to work with new UserRoles, fix Templates creation job [SCI-6270] 2021-11-15 21:36:06 +01:00
aignatov-bio
8f9ab4f6c3
Refactor permissions breadcrumbs for users [SCI-6260] (#3665) 
* Refactor permissions breadcrumbs for users [SCI-6260]

* Change creator assignments to automatically [SCI-6260]

Co-authored-by: Anton <anton@scinote.net>
 2021-11-15 15:02:22 +01:00
artoscinote
4ce0c53d36
Implemented reset role functionality [SCI-6261] (#3662) 
* Implemented reset role functionality [SCI-6261]

* Linter fixes [SCI-6261]
 2021-11-15 11:12:31 +01:00
artoscinote
a6c61c2b4e
Fixed permission issues when moving experiment [SCI-6257] (#3655) 
* Fixed permission issues when moving experiment [SCI-6257]

* Copy fixes [SCI-6248]

* Use canaid helper instead of permission_granted [SCI-6257]

* Fixes [SCI-6257]
 2021-11-12 12:59:49 +01:00
Oleksii Kriuchykhin
f73f9dd2c1 Fix activities for assigning to experiments and tasks [SCI-6254] 2021-11-11 21:30:30 +01:00
artoscinote
0eacb91bed
Renamed 'group_user_role', fixed public project migration [SCI-6234] (#3642) 
* Renamed 'group_user_role', fixed public project migration [SCI-6234]

* Moved public project update inside loop [SCI-6234]
 2021-11-10 09:52:37 +01:00
aignatov-bio
3372b679da
Change role assigning role on object creation [SCI-6247] (#3645) 
Co-authored-by: Anton <anton@scinote.net>
 2021-11-09 16:10:43 +01:00
artoscinote
083efd77fd
Generalize user role propagation job [SCI-6246] (#3649) 2021-11-09 16:09:12 +01:00
Alex Kriuchykhin
9a967cfe40
Fix user removal from the team [SCI-6201] (#3637) 2021-11-09 09:35:36 +01:00
Martin Artnik
81e7b80bae Fixed removal of user from team [SCI-6239] 2021-11-08 16:06:28 +01:00
artoscinote
3e3e2cc24e
Revert "Implement experiment and task access removal" [SCI-6218] (#3635) 
* Revert "Implement experiment and task access removal [SCI-6156] (#3614)"

This reverts commit 2abefd78e6.

* Rename assign to module activity to designate to my module [SCI-6218]
 2021-11-05 15:44:14 +01:00
Oleksii Kriuchykhin
a99599efea Merge branch 'features/new_permissions' into develop 2021-10-29 15:16:30 +02:00
artoscinote
2abefd78e6
Implement experiment and task access removal [SCI-6156] (#3614) 2021-10-28 16:32:05 +02:00
Alex Kriuchykhin
f8e433a0ca
Merge branch 'features/new_permissions' into ok_SCI_6151 2021-10-28 14:31:47 +02:00
Alex Kriuchykhin
1bde37db78
Merge branch 'develop' into ok_SCI_5579 2021-10-28 13:26:27 +02:00
Oleksii Kriuchykhin
b1b7dbb8ef Improve code style [SCI-6151] 2021-10-28 12:58:42 +02:00
aignatov-bio
9e3d64bbb6
Fix projects list in clone experiment dropdowns [SCI-6139] (#3592) 
Co-authored-by: Anton <anton@scinote.net>
 2021-10-27 13:55:49 +02:00
aignatov-bio
22034089a6
Update experiment move service [SCI-6149] (#3599) 
* Update experiment move service [SCI-6149]

* Move permission check to helper [SCI-6149]

Co-authored-by: Anton <anton@scinote.net>
 2021-10-27 13:48:52 +02:00
aignatov-bio
7d6136435d
Change my_module owner after copy [SCI-6176] (#3611) 
Co-authored-by: Anton <anton@scinote.net>
 2021-10-26 12:06:35 +02:00
aignatov-bio
1a05c3a40c
Update canvas task cards [SCI-5021] (#3608) 
Co-authored-by: Anton <anton@scinote.net>
 2021-10-26 12:06:26 +02:00
Alex Kriuchykhin
f6a30cac6c
Merge pull request #3593 from okriuchykhin/ok_SCI_6134 
Change Dashboard::RecentWorkService to use new user roles [SCI-6134]
 2021-10-26 11:43:54 +02:00
aignatov-bio
edb09dd099
Update copy experiment permission checks [SCI-6147] (#3598) 
Co-authored-by: Anton <anton@scinote.net>
 2021-10-26 11:40:54 +02:00
Oleksii Kriuchykhin
2051ea5360 Update the search to abide the permissions [SCI-6151] 2021-10-22 11:43:20 +02:00
Martin Artnik
6249465b34 Fixed updating user assignment in MyModuleMember [SCI-6169] 2021-10-21 15:51:17 +02:00
artoscinote
3746332c30
Fixed cached user lists when changing assignments [SCI-6137] (#3597) 
Fixed cache invalidation for assignables, current_user missing in cache keys [SCI-6137]
 2021-10-19 16:00:52 +02:00
artoscinote
c63090da8c
Fixed scopes and added permission checks to quick create services [SCI-6135] (#3584) 2021-10-14 13:13:29 +02:00
Oleksii Kriuchykhin
bc806f0c86 Change Dashboard::RecentWorkService to use new user roles [SCI-6134] 2021-10-13 14:12:24 +02:00
Martin Artnik
6ea34adb22 Fixed designated users relation 2021-10-13 13:39:28 +02:00
artoscinote
5bda5acebc
Fixed the rule for moving experiment [SCI-6128] (#3587) 2021-10-13 13:32:11 +02:00
artoscinote
92fab5dd4f
Update usage of user_my_modules [SCI-6121] (#3585) 2021-10-13 10:10:14 +02:00
artoscinote
462f8ffc47
Fixed unassigned user methods, order by name [SCI-6104] (#3589) 2021-10-13 09:50:06 +02:00
artoscinote
0fe6cd66e5
Fix permission migration, fix assignable scope [SCI-6127] (#3580) 2021-10-05 13:45:52 +02:00
artoscinote
6fbb22922a
Fix project user assignment [SCI_5925] (#3577) 2021-10-05 13:45:34 +02:00
artoscinote
a18839f529
Automatically assign team admins as project owners [SCI_6119] (#3575) 2021-10-04 15:47:28 +02:00
aignatov-bio
116c09cd8a
Update users selection for notifications [SCI-6110] (#3573) 2021-10-04 15:43:28 +02:00
aignatov-bio
982aaf887c
Fix duplicate objects on dashboard [SCI-5948] (#3576) 2021-10-04 15:41:35 +02:00
artoscinote
75d6a17cb7
Fix ProjectOverviewService and automatic project assignment [SCI_6117] (#3572) 2021-10-04 11:20:47 +02:00
Martin Artnik
4f4ab05740 Fix project search in quick start controller [SCI-5915] 2021-10-01 12:20:51 +02:00
aignatov-bio
dba6ed8515 Use default repository table state [SCI-6089] 2021-09-30 13:30:17 +02:00
artoscinote
f68d724202
Rework experiment permissions [SCI-6054] (#3538) 
* Rework experiment permissions [SCI-6054]
 2021-09-30 11:32:11 +02:00
Martin Artnik
49b9ee37cc Merge branch 'develop' into features/bmt-search 2021-09-24 11:01:27 +02:00
Oleksii Kriuchykhin
f806a56cac Update existing roles with new permissions/abilities [SCI-6076] 2021-09-24 10:29:24 +02:00
artoscinote
895509a26c
Merge pull request #3543 from artoscinote/ma_SCI_6056 
Reworked MyModule permissions [SCI-6056]
 2021-09-17 15:19:01 +02:00
Martin Artnik
04413c6cc6 Make permission names consistent with spreadsheet [SCI-6056] 2021-09-17 10:41:28 +02:00
Oleksii Kriuchykhin
0762323337 Update/implement permission checks in the project related controllers [SCI-6042] 2021-09-15 14:39:47 +02:00
Martin Artnik
e8f57e9e99 Reworked MyModule permissions [SCI-6056] 2021-09-14 11:08:35 +02:00
Alex Kriuchykhin
3ca593d7f9
Merge pull request #3513 from okriuchykhin/ok_SCI_5663 
Allow project management to it's creator if project has no assigned users [SCI-5663]
 2021-09-14 11:08:25 +02:00
Martin Artnik
975a8910a8 Updated project permission helpers [SCI-6041] 2021-09-07 11:27:52 +02:00
Martin Artnik
ade1385392 Merge branch 'develop' into features/bmt-search 2021-09-06 10:51:04 +02:00
Martin Artnik
7e6ca3be8a Merge branch 'develop' into features/new_permissions 2021-09-06 10:33:32 +02:00
Alex Kriuchykhin
a63f047ae7
Merge pull request #3512 from okriuchykhin/ok_SCI_6031 
Add configuration variable for webhooks, disable by default [SCI-6031]
 2021-08-30 15:35:38 +02:00
Miha Mencin
50d33896e3
Merge pull request #3480 from artoscinote/ma_SCI_5963 
Downcase all user emails, downcase when finding user [SCI-5963]
 2021-08-30 13:00:12 +02:00
Martin Artnik
e08b406185 Added additionalDataFilter [SCI-6026] 2021-08-30 10:49:15 +02:00
aignatov-bio
b269f3f612 Add saved filters backend [SCI-5977] (#3509) 
* Add saved filters backend [SCI-5977]

* Rework filter saving [SCI-5977]

Co-authored-by: Martin Artnik <martin@scinote.net>
 2021-08-30 10:49:15 +02:00
Oleksii Kriuchykhin
d4ef2b1bd4 Add BMT inventory model [SCI-6009] 2021-08-30 10:49:15 +02:00
Oleksii Kriuchykhin
0b74f34de7 Add external IDs to repositories [SCI-5990] 2021-08-30 10:49:14 +02:00
Oleksii Kriuchykhin
4665743d02 Allow project management to it's creator if project has no assigned users [SCI-5663] 2021-08-26 16:56:21 +02:00
Oleksii Kriuchykhin
d67f7691a1 Add configuration variable for webhooks, disable by default [SCI-6031] 2021-08-26 14:08:15 +02:00
artoscinote
295d27f0d7
Added option to override default OTP drift time [SCI-6027] (#3507) 2021-08-25 14:02:25 +02:00
Martin Artnik
143e491016 Fixed registering bioeddie molecule on step [SCI-5985] 2021-08-11 14:10:05 +02:00
Martin Artnik
5d5f406e9a Downcase all user emails, downcase when finding user [SCI-5963] 2021-08-11 13:18:58 +02:00
Martin Artnik
57d5e6c2a7 Merge branch 'develop' into features/barcodes 2021-08-03 13:36:36 +02:00
artoscinote
f839cb5256
Merge pull request #3464 from biosistemika/features/bioeddie-integration 
Features/bioeddie integration
 2021-08-03 13:32:53 +02:00
artoscinote
c41247a5fd
Merge pull request #3439 from artoscinote/ma_SCI_5879 
Implement Save & Register molecule [SCI-5879]
 2021-08-03 12:15:46 +02:00
Martin Artnik
13ddff89a8 Fixed Asset relation handling in activities [ma_SCI_5789] 2021-08-03 09:59:06 +02:00
Martin Artnik
a82af505eb Merge branch 'develop' into features/webhooks 2021-08-02 16:22:52 +02:00
Martin Artnik
ae174b276a Code review fixes and error handling improvements [SCI-5942] 2021-08-02 15:42:53 +02:00
Martin Artnik
123e415a4f Print status backend + FE integration [SCI-5942] 2021-08-02 15:42:53 +02:00
aignatov-bio
a782ce50d1
Add bio eddie files to export all [SCI-5877] (#3426) 2021-08-02 13:27:02 +02:00
Martin Artnik
e63a665140 Merge branch 'develop' into features/barcodes 2021-08-02 11:15:48 +02:00
Martin Artnik
0f417f9730 Merge branch 'develop' into features/barcodes 2021-07-29 13:32:17 +02:00
Martin Artnik
5c4f923854 Corrected type for 'assignment' activities [SCI-5662] 2021-07-29 10:13:28 +02:00
Martin Artnik
67f4e81a3a Merge branch 'develop' into features/new_permissions 2021-07-28 15:16:47 +02:00
Martin Artnik
b41ee028ca Added overridable send permission method to notifications [SCI-5938] 2021-07-28 13:14:07 +02:00
Martin Artnik
b32b207f3d Added FLUICS API client [SCI-5939] 2021-07-23 13:52:28 +02:00
Oleksii Kriuchykhin
c26dcf4b23 Replace empty? with blank? [SCI-5579] 2021-07-23 11:56:28 +02:00
Martin Artnik
4bb080c25b Merge migrations, code fixes [SCI-5800] 2021-07-22 10:51:03 +02:00
Alex Kriuchykhin
dfa2a7775d
Merge pull request #3422 from okriuchykhin/ok_SCI_5847 
Fix repository cell joining and preloading [SCI-5847]
 2021-07-21 13:18:21 +02:00
aignatov-bio
4de35c983a
Open HELM files in bio eddie [SCI-5890] (#3442) 2021-07-20 13:06:47 +02:00
Martin Artnik
c43e1cfbe5 Fixed db error during build 2021-07-20 10:20:47 +02:00
artoscinote
3a281ce9dc
Merge pull request #3433 from artoscinote/ma_SCI_5607 
Also send notification to the user that was unassigned from task [SCI-5607]
 2021-07-20 09:41:46 +02:00
artoscinote
5f9c04844f
Added prefixed IDs to repository rows (items) [SCI-5909] (#3441) 
* Added prefixed IDs to repository rows (items) [SCI-5909]

* Fix prefixed id queries to work with joins, use subquery in repository search [SCI-5909]

* Fixed accessing repository_row parent code [SCI-5909]

* Better handling of repository_row code display [SCI-5909]

* Fix index warning for id prefixed models issue setting up project [SCI-5909]
 2021-07-19 14:23:36 +02:00
Martin Artnik
a8f8ab8ba9 Implement label templates with default ZPL template [SCI-5902] 2021-07-19 09:44:14 +02:00
Martin Artnik
96a5b97bdb Implement Save & Register molecule [SCI-5879] 2021-07-15 12:37:04 +02:00
Martin Artnik
1985b7a7e0 Also send task unassign notification to the person that was unassigned [SCI-5607] 2021-07-13 12:11:49 +02:00
zmagoD
277da3abcf fix merge issues 2021-07-10 15:20:55 +02:00
Oleksii Kriuchykhin
549fc8e5a0 Fix repository cell joining and preloading [SCI-5847] 2021-07-07 17:43:51 +02:00
Martin Artnik
fdf9c5f6ae Reset file_processing when new file is upladed [SCI-5870] 2021-07-07 14:57:35 +02:00
Oleksii Kriuchykhin
d1208bad0b Merge branch 'develop' into features/new_permissions 2021-07-07 13:44:36 +02:00
artoscinote
723b594632
Merge pull request #3398 from artoscinote/ma_SCI_5828 
Expose experiment IDs in interface and reports [SCI-5828]
 2021-06-30 12:58:25 +02:00
Martin Artnik
e1b0b65465 Improved code style, fixed bug [SCI-5828] 2021-06-29 15:57:23 +02:00
zmagoD
9c812e84bd setup logic to group assign all team members and handle the unassignments logic 2021-06-27 13:22:19 +02:00
Martin Artnik
b2e2186d9f Remove unnecessary tasks hash from full export [SCI-5840] 2021-06-22 14:57:07 +02:00
Martin Artnik
c4e6b0bbaf Fixed export all report html generation [SCI-5840] 2021-06-22 14:50:47 +02:00
Martin Artnik
eaa713f5b8 Fix indices [SCI-5829] 2021-06-22 12:51:25 +02:00
zmagoD
9b87fce840 add read check to view methods 2021-06-20 11:11:03 +02:00
zmagoD
ad10befcc4 add new manage access permission to PET levels 2021-06-19 17:17:57 +02:00
Martin Artnik
29ff910eba Added searching experiments by EX[ID] [SCI-5829] 2021-06-18 14:12:59 +02:00
Martin Artnik
0866a2e251 Added experiment ID to card and table views [SCI-5828] 2021-06-18 14:12:59 +02:00
Oleksii Kriuchykhin
bb458abec6 Remove old reports code [SCI-5650] 2021-06-18 10:40:00 +02:00
Martin Artnik
47071e23a1 Added specs for webhooks 2021-06-17 14:54:30 +02:00
Martin Artnik
4ee50f87d5 Implement webhook service and scheduling jobs [SCI-5801, SCI-5802] 2021-06-17 09:19:04 +02:00
Oleksii Kriuchykhin
85a5cca98a Fix repository snapshots for export all [SCI-5776] 2021-06-16 16:17:12 +02:00
zmagoD
25802d7043 adopt move/clone my module logic to work with new user assignments (SCI-5805) 2021-06-12 18:51:55 +02:00
zmagoD
7128987418 fix code style 2021-06-12 10:58:26 +02:00
zmagoD
7e4f47f667 update experiment and my_module search 2021-06-12 10:27:53 +02:00
zmagoD
8997ba10d1 mark user assigmetns when they are created manually or automatically 2021-06-12 09:36:41 +02:00
aignatov-bio
afe2a19c88
Add webhooks management [SCI-5767] (#3376) 
* Add webhooks managment [SCI-5767]

* Markup fixes [SCI-5676]
 2021-06-09 12:53:11 +02:00
Miha Mencin
48202c88d1
Merge pull request #3350 from aignatov-bio/ai-sci-5601-add-pdf-preview-for-docx-report 
Add pdf preview for docx reports [SCI-5601]
 2021-06-09 11:27:45 +02:00
aignatov-bio
16f83a3e60 Remove docx preview processing flag [SCI-5601] 2021-06-09 10:58:27 +02:00
Miha Mencin
46e2adf2e3
Merge pull request #3334 from okriuchykhin/ok_SCI_5730 
Improve filtering for inventories [SCI-5730]
 2021-06-09 09:50:56 +02:00
Oleksii Kriuchykhin
16bad9eb9c Fix export all functionality [SCI-5776] 2021-06-08 14:21:34 +02:00
zmagoD
ddaa4b4c57 replase user_projects with user_assignment where the permissions are calculated 2021-06-06 10:29:01 +02:00
zmagoD
784e43e328 create user_assignments for all child objects when the user is attached to the project 2021-06-06 09:54:47 +02:00
aignatov-bio
3c7592657c Add activity filters [SCI-5765] 2021-05-31 13:39:10 +02:00
zmagoD
debff7bc85 fix code style 2021-05-29 19:25:46 +02:00
Alex Kriuchykhin
6d56ea2ee0
Merge pull request #3358 from okriuchykhin/ok_SCI_5773 
Remove experiment from report if it is moved to another project [SCI-5773]
 2021-05-28 14:02:30 +02:00
Alex Kriuchykhin
cdbcbd0409
Merge pull request #3357 from okriuchykhin/ok_SCI_5751 
Fix deletion of old reports [SCI-5751]
 2021-05-28 13:59:36 +02:00
Oleksii Kriuchykhin
cc8cc595d7 Remove experiment from report if it is moved to another project [SCI-5773] 2021-05-28 11:31:45 +02:00
Oleksii Kriuchykhin
70f0535dbd Fix deletion of old reports [SCI-5751] 2021-05-27 16:31:58 +02:00
aignatov-bio
24f4f6cbb2 Fix report experiments sorting [SCI-5762] 2021-05-27 12:44:45 +02:00
aignatov-bio
2be59bf8b2 Add pdf preview for docx reports [SCI-5601] 2021-05-25 15:14:50 +02:00
Miha Mencin
e675e4004e
Merge pull request #3348 from aignatov-bio/ai-sci-5753-fix-export-all 
Fast fix for export all [SCI-5753]
 2021-05-24 15:19:11 +02:00
aignatov-bio
2651e8ff35 Fast fix for export all [SCI-5753] 2021-05-24 13:16:43 +02:00
zmagoD
300c1521fd add new API endpoints and fix/update ExperimentMember and MyModuleMember modules 2021-05-22 18:36:30 +02:00
zmagoD
be94cb09c2 fix code style 2021-05-22 14:41:56 +02:00
zmagoD
67cf09e030 log activities on experiment and my_module assignment change 2021-05-22 13:59:27 +02:00
Oleksii Kriuchykhin
64ce35c8da Refactor DOCX report generator [SCI-5735] 2021-05-21 16:40:38 +02:00
Oleksii Kriuchykhin
29c83ffbb1 Merge branch 'develop' into features/new-reports 2021-05-21 11:04:17 +02:00
Oleksii Kriuchykhin
7d9a79456a Remove task from report if it is moved to another experiment [SCI-5741] 2021-05-20 21:21:27 +02:00
Oleksii Kriuchykhin
0ff1277dbf Improve filtering for inventories [SCI-5730] 2021-05-19 22:48:52 +02:00
aignatov-bio
0b97ffe5c6 xRemove default value from pdf/docx_file_status [SCI-5728] 2021-05-18 15:24:13 +02:00
Miha Mencin
491dc22294
Merge pull request #3321 from okriuchykhin/ok_SCI_5724 
Fix default empty options for report wizard first page [SCI-5724]
 2021-05-17 10:28:57 +02:00
Miha Mencin
d952edd389
Merge pull request #3316 from okriuchykhin/ok_SCI_5702 
Add generation error states to reports [SCI-5702]
 2021-05-17 10:16:06 +02:00
zmagoD
c23c01c01c remove user projects enpoints, fix the role name display 2021-05-16 12:03:16 +02:00
zmagoD
de4c28069a fix experiment level styling issues and update the dropdown placeholerds 2021-05-16 11:04:04 +02:00
Oleksii Kriuchykhin
167ebd3d58 Fix default selection of results in reports wizard [SCI-5726] 2021-05-13 15:44:06 +02:00
Oleksii Kriuchykhin
697809ff6a Fix default empty options for report wizard first page [SCI-5724] 2021-05-13 14:24:47 +02:00
aignatov-bio
3ba96be787 Remove report name uniqness [SCI-5718] 2021-05-12 14:56:22 +02:00
Oleksii Kriuchykhin
a175e83a16 Add generation error states to reports [SCI-5702] 2021-05-11 14:52:02 +02:00
zmagoD
5ee38966a0 Merge branch 'features/new_permissions' of https://github.com/biosistemika/scinote-web into new_perimssions-managing-project-ui 2021-05-11 08:36:39 +02:00
zmagoD
d145dd6d36 add my module assigments modals 2021-05-09 16:59:10 +02:00
zmagoD
ac91d9c2c4 add assign user permission to experiment level 2021-05-08 18:06:07 +02:00
zmagoD
c0eb38b564 Merge branch 'develop' of https://github.com/biosistemika/scinote-web into features/new_permissions 2021-05-08 10:33:43 +02:00
zmagoD
331a68e9b6 fix new experiment creation 2021-05-08 10:05:22 +02:00
Oleksii Kriuchykhin
b67f2a21f5 Add default settings to existing reports [SCI-5619][SCI-5672] 2021-05-06 17:33:58 +02:00
zmagoD
47cb1b31dc fix code style 2021-05-02 11:36:10 +02:00
zmagoD
c1d98f421d update scenarios and UI logic to handle project page reload after modal close 2021-05-02 11:22:59 +02:00
zmagoD
11e5662c47 add fe logic for disable/enable fields 2021-04-30 13:26:06 +02:00
zmagoD
8a74546cdf fix the logic for addin/editing new project members 2021-04-28 18:02:18 +02:00
Oleksii Kriuchykhin
bca88188de Limit created report relations depth to tasks [SCI-5665] 2021-04-28 15:33:30 +02:00
zmagoD
c136d953d0 create form object for role assigment, create helper object for project member, added new user_projects modal 2021-04-24 18:43:28 +02:00
aignatov-bio
d18a54c874
Update create and update action for reports controller [SCI-5641] (#3260) 
Update create and update action [SCI-5641]
 2021-04-20 13:35:40 +02:00
zmagoD
04ef7a4478 add show and edit permissions modal 2021-04-18 17:19:16 +02:00
zmagoD
3333241c9a add CTA for project members modal SCI-5645 2021-04-18 12:23:29 +02:00
Alex Kriuchykhin
80827ce761
Merge pull request #3257 from biosistemika/SCI-5623-add-external-id-to-user 
SCI-5623 add external id to user
 2021-04-14 16:15:43 +02:00
miha
e610683d5c [SCI-5623] added external_id setting to user 2021-04-14 09:44:09 +02:00
aignatov-bio
101d46956c Add logic for preparing wizard data for report [SCI-5593] 2021-04-12 12:42:22 +02:00
miha
4f7f257b78 Remove cascading save from step 2021-04-12 12:20:05 +02:00
miha
2e45093856 fix a stupid2 2021-04-12 10:31:35 +02:00
miha
b917a0c3e0 fix a stupid 2021-04-12 10:30:37 +02:00
miha
56ebc3dc07 [SCI-5635] add a migration to fix broken steps, fix the api so it sets last_modified_by_id, minor step model refactor 
migration fix

remove the conditoin for set_last_modified_by callback

set the last_modified_by_id in before_save callback (in case it is not set yet)

remove trailing spaces

Set last modified in protocl import service
 2021-04-12 09:59:00 +02:00
Oleksii Kriuchykhin
67302da968 Add settings to reports [SCI-5612] 2021-04-08 17:40:16 +02:00
Oleksii Kriuchykhin
a9ac8452f2 Add dynamic form elements in report wizard step 1 [SCI-5591] 2021-04-06 13:56:24 +02:00
aignatov-bio
82be23db81 Add project and template selector [SCI-5570] 2021-03-31 15:32:03 +02:00
Oleksii Kriuchykhin
2b2b6f7774 Fix for API float parsing in the inventory number type column [SCI-5604] 2021-03-29 15:59:24 +02:00
miha
11284d3b87 [SCI-5577] filter notifications 2021-03-29 09:52:57 +02:00
Oleksii Kriuchykhin
f7c865974d Switch to graphviz gem [SCI-5596] 2021-03-25 17:42:57 +01:00
aignatov-bio
a7d0f5050d Remove project on project restore [SCI-5582] 2021-03-22 15:20:47 +01:00
Oleksii Kriuchykhin
d006b813b9 Add pdf and docx attachments to reports [SCI-5558] 2021-03-15 13:30:03 +01:00
Urban Rotnik
8202181095
Merge pull request #3186 from urbanrotnik/ur-sci-4140-fix-notifications 
Bring back old notifications [SCI-4140]
 2021-03-09 14:54:08 +01:00
Urban Rotnik
ab1477997a Update variables name 2021-03-09 14:50:14 +01:00
Urban Rotnik
96ef0c10da
Merge pull request #3148 from urbanrotnik/ur-sci-5450-remamber-user-view-mode 
Store Table/Cards view setting per user [SCI-5450]
 2021-03-08 11:48:33 +01:00
aignatov-bio
df4297f6f7 Merge branch 'develop' into features/local_file_previews 2021-03-08 11:30:47 +01:00
Urban Rotnik
235f19cf25 Store Table/Cards view setting per user 
SCI-5450
 2021-03-04 14:56:59 +01:00
Oleksii Kriuchykhin
2b5709e75f Improve behavior of the scheduler, add caching to system notifications sync service [SCI-5526] 2021-03-02 17:28:07 +01:00
Oleksii Kriuchykhin
d8cffe53c7 Add migration for new user assignments to projects [SCI-5478] 2021-03-01 14:28:21 +01:00
aignatov-bio
0c5a1a3e21 Fix tests [SCI-5528] 2021-02-26 16:29:56 +01:00
Urban Rotnik
1bb2393655 Use translations 
SCI-4140
 2021-02-25 11:59:26 +01:00
Urban Rotnik
347f208480 Bring back old notifications 
SCI-4140
 2021-02-25 11:59:14 +01:00
Oleksii Kriuchykhin
49194d1a45 Prepare initial user roles in the database [SCI-5435] 2021-02-22 11:58:40 +01:00
Oleksii Kriuchykhin
3b90225c5a Add new permission checking logic [SCI-5436] 2021-02-22 11:55:48 +01:00
aignatov-bio
58a5126a13 Fix normalize_module_position method [SCI-5508] 2021-02-19 14:41:57 +01:00
Oleksii Kriuchykhin
7d89088b14 Multiple small bugfixes [SCI-5494] 2021-02-18 13:55:03 +01:00
Urban Rotnik
79cacb41c4 Fixed uniqueness name validation for ProjectFolder 2021-02-12 13:35:44 +01:00
aignatov-bio
f3c1d123d4 Fix duplicate code 2021-02-05 11:28:38 +01:00
Miha Mencin
107b7a0427
Merge pull request #3114 from urbanrotnik/ur-sci-5417-folders-name-uniquness-scope 
Add Archived to ProjectFolder name uniqueness scope [SCI-5417]
 2021-02-05 09:59:40 +01:00
Miha Mencin
0e9b714c9f
Applying Alex's suggestion 
Co-authored-by: Alex Kriuchykhin <okriuchykhin@biosistemika.com>
 2021-02-05 08:19:42 +01:00
Oleksii Kriuchykhin
1e3e701788 Add models for new permissions objects [SCI-5434] 2021-02-04 14:08:20 +01:00
Oleksii Kriuchykhin
c62c464902 Implement editing options and modals for experiment card [SCI-5367] 2021-02-04 12:06:51 +01:00
Alex Kriuchykhin
1466ae114f
Merge pull request #3027 from okriuchykhin/ok_SCI_5246 
Remove Demo project and Samples inventory [SCI-5246][SCI-5248]
 2021-02-04 11:28:09 +01:00
Oleksii Kriuchykhin
bba8e0326d Fix module normalization in canvas update [SCI-5463] 2021-02-03 14:58:04 +01:00
Oleksii Kriuchykhin
324c268594 Remove Demo project and Samples repository [SCI-5246][SCI-5248] 2021-02-01 15:02:06 +01:00
aignatov-bio
8be9d3b14c
Merge pull request #3126 from biosistemika/features/new-experiments-page 
Features/new experiments page
 2021-01-29 13:28:11 +01:00
Oleksii Kriuchykhin
75da67b937 Update Rails to 6.1.1, ruby to 2.7.2 [SCI-5459] 2021-01-28 14:43:45 +01:00
Alex Kriuchykhin
f1124f9ea0
Add experiments overview service [SCI-5430] (#3116) 2021-01-28 12:57:04 +01:00
Urban Rotnik
68ac663370 Add Archived to ProjectFolder name uniqueness scope 
SCI-5417
 2021-01-22 08:56:43 +01:00
Urban Rotnik
0a1abf83c6
Merge pull request #3099 from urbanrotnik/ur-sci-5351 
Fix folders exports, add error message [SCI-5351]
 2021-01-19 11:01:08 +01:00
Urban Rotnik
92d8199381 Add parent_folder validation 
SCI-5422
 2021-01-19 10:40:29 +01:00
Urban Rotnik
ddbc22b274 Fix folders exports, add error message 
SCI-5351
 2021-01-19 09:47:42 +01:00
Urban Rotnik
485aa0d541 Remove project_folder in callback 2021-01-12 13:04:36 +01:00
Urban Rotnik
996f604df1 Touch parent folder of folder 2021-01-12 10:46:19 +01:00
Urban Rotnik
f478ad91c3
Merge pull request #3058 from urbanrotnik/ur-sci-5312 
Folder name uniqueness validation on folder level and renaming [SCI-5312]
 2021-01-08 10:40:52 +01:00
Urban Rotnik
fbce70be0c Add unique validation and ensure_uniqueness callback while moving folder 
[SCI-5312]
 2021-01-08 08:21:09 +01:00
Urban Rotnik
427b5d7107
Merge pull request #3059 from biosistemika/features/folders 
Features/folders into develop
 2021-01-08 06:26:44 +01:00
Urban Rotnik
20acd9b693 Fix controller and tests 2021-01-07 17:41:39 +01:00
Oleksii Kriuchykhin
f43340a849 Fix projects visibility in the sidebar [SCI-5338] 2021-01-05 13:50:42 +01:00
Alex Kriuchykhin
a8991356b5
Merge pull request #3033 from okriuchykhin/ok_SCI_5341 
Fix restore action for experiments and tasks [SCI-5341]
 2021-01-05 10:09:39 +01:00
Oleksii Kriuchykhin
58cce0f153 Improve task restoring and refactor flash messages [SCI-5341] 2021-01-04 17:00:23 +01:00
Alex Kriuchykhin
163a2d1e60
Merge pull request #3042 from okriuchykhin/ok_SCI_5340 
Make active projects view default [SCI-5340]
 2021-01-04 11:56:22 +01:00
Oleksii Kriuchykhin
ffd9132b52 Make active projects view default [SCI-5340] 2020-12-31 16:00:26 +01:00
Oleksii Kriuchykhin
0cb221609a Fix global activities page [SCI-5324] 2020-12-27 22:05:15 +01:00
aignatov-bio
b3faa170fb
PDF preview to file preview and inline view [SCI-5299][SCI-5298] (#3018) 
* Add PDF Preview [SCI-5299]
 2020-12-22 15:25:30 +01:00
Urban Rotnik
4ff1770d50 Remove uniqueness validation on Experiment name 
SCI-5288
 2020-12-18 16:48:50 +01:00
Oleksii Kriuchykhin
67b3f853d7 Merge branch 'develop' into features/folders 2020-12-18 14:51:21 +01:00
Urban Rotnik
d3e38c89f8 Update BE sorting for archived fodlers&projects 
SCI-5306
 2020-12-18 11:27:17 +01:00
Urban Rotnik
7c0ad021de Update sorting dropdown 2020-12-18 11:08:38 +01:00
Urban Rotnik
87ca79717c Add separate sorting for active/archived view 
[SCI-5306]
 2020-12-18 08:41:51 +01:00
Miha Mencin
6dc4fae45b
Merge pull request #3003 from okriuchykhin/ok_SCI_5268 
Archiving: add 'archived' flag on folder [SCI-5268]
 2020-12-17 13:13:26 +01:00
aignatov-bio
2ca7b81cea
Update archived view for experiments [SCI-5270][[SCI-5271][SCI-5277] (#3011) 
* Change experiment archived card [SCI-5270]
 2020-12-17 13:07:30 +01:00
Oleksii Kriuchykhin
f150a11c4f Archiving: add 'archived' flag on folder [SCI-5268] 2020-12-17 12:47:23 +01:00
Oleksii Kriuchykhin
0c65f3f7c2 Implement sorting on the project screen (when filterin/searching) [SCI-5281] 2020-12-17 12:43:09 +01:00
Miha Mencin
ba3db65437
Merge pull request #3008 from okriuchykhin/ok_SCI_5273 
Remove the 'Archived tasks' tab and refactor sidebar to include archived [SCI-5273]
 2020-12-17 09:44:40 +01:00
Miha Mencin
ea9f3dcada
Merge pull request #2996 from okriuchykhin/ok_SCI_5253 
Implement the 'seen comments' functionality (red dot) for the comments [SCI-5253]
 2020-12-17 09:17:44 +01:00
Oleksii Kriuchykhin
2a666a3718 Implement additional preview type PDF of the whole document [SCI-5297] 2020-12-16 12:51:10 +01:00
Oleksii Kriuchykhin
94b6c96e48 Remove the 'Archived tasks' tab and refactor sidebar to include archived [SCI-5273] 2020-12-12 22:46:30 +01:00
aignatov-bio
6a44e23697
Add projects sidebar [SCI-5178] (#2995) 
* Add projects sidebar navigation [SCI-5178]
 2020-12-08 16:07:26 +01:00
Oleksii Kriuchykhin
62374bee0a Implement the 'seen comments' functionality (red dot) for the comments [SCI-5253] 2020-12-07 11:04:33 +01:00
Urban Rotnik
7773afbcdb Add activities for Project Folders [SCI-5181] 2020-12-04 12:03:49 +01:00
Urban Rotnik
87b5552b27 Add equals team validations for project and folder 2020-12-02 14:53:46 +01:00
aignatov-bio
a27c78e445
Merge pull request #2988 from aignatov-bio/ai-sci-5260-add-direction-condition-for-status-consequences 
Add direction condition for status consequences [SCI-5260]
 2020-12-01 16:14:31 +01:00
aignatov-bio
d1af011c0c [SCI-5260] Fix markup 2020-12-01 15:10:28 +01:00
aignatov-bio
04624692d3 [SCI-5260] Add afterward and backward actions to consequence 2020-12-01 15:07:01 +01:00