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Author SHA1 Message Date
artoscinote 774ffa60d0
Fix creating new users on projects for team admins [SCI-6273] (#3685) 2021-11-19 13:58:54 +01:00
artoscinote 9b06a24288
Added granular task permissions, permission check fixes [SCI-6278] (#3683) 2021-11-19 13:24:57 +01:00
artoscinote 2d6521db42
Fix delete connection in API [SCI-6087] (#3684) 2021-11-19 13:24:29 +01:00
artoscinote ee8cb033fa
Fix keys in connection serializer, fix destroy method [SCI-6087] (#3677) 2021-11-18 16:10:07 +01:00
Alex Kriuchykhin ebfd2f7924
Merge pull request #3682 from okriuchykhin/ok_SCI_6088 
Add API endpoint for Cloning Experiments [SCI-6088]
 2021-11-18 15:26:19 +01:00
Alex Kriuchykhin 2104bc489a
Merge pull request #3678 from okriuchykhin/ok_SCI_6275 
Fix permissions check for steps completion in the API [SCI-6275]
 2021-11-18 14:11:03 +01:00
Oleksii Kriuchykhin b35c283cc5 Fix permissions check for steps completion in the API [SCI-6275] 2021-11-17 21:25:31 +01:00
artoscinote 6b6a49428c
Add additional info to API project_user_assignments type error [SCI-6273] (#3674) 
* Add additional info to API project_user_assignments type error [SCI-6273]

* Generalize user_assignments api controllers [SCI-6237]
 2021-11-17 16:28:02 +01:00
aignatov-bio 2a135ac120
Fix repository archive title [SCI-6267] (#3671) 
Co-authored-by: Anton <anton@scinote.net>
 2021-11-17 14:53:04 +01:00
aignatov-bio 57de414284
Fix user assignment for team import [SCI-6242] (#3675) 
Co-authored-by: Anton <anton@scinote.net>
 2021-11-17 13:33:29 +01:00
artoscinote 2e84418304
Add create/destroy endpoints to connections API, add tests [SCI-6087] (#3563) 2021-11-17 12:11:22 +01:00
aignatov-bio 4b79ba209d
Remove visibility condition from projects scope [SCI-6188] (#3667) 
Co-authored-by: Anton <anton@scinote.net>
 2021-11-17 10:16:54 +01:00
Alex Kriuchykhin 8609b84131
Merge pull request #3669 from okriuchykhin/ok_SCI_6270 
Fix seeds to work with new UserRoles, fix Templates creation job [SCI-6270]
 2021-11-17 09:59:30 +01:00
Anton c00a7b7b8f Update bmt filters default state [SCI-6090] 2021-11-16 15:14:00 +01:00
aignatov-bio 06788bfeb6
Update CSS for BMT filters [SCI-6084] (#3652) 
* Update css for bmt filters [SCI-6084]

* Create shared component for dropdown [SCI-6084]

Co-authored-by: Anton <anton@scinote.net>
 2021-11-16 14:46:08 +01:00
aignatov-bio 27d6453527
After clear filters not reload table [SCI-6101][SCI-6102] (#3661) 
Co-authored-by: Anton <anton@scinote.net>
 2021-11-16 14:12:57 +01:00
artoscinote d08882e7f2
Style and copy fix [SCI-6272] (#3670) 2021-11-16 11:25:47 +01:00
artoscinote 0749fbdf7b
Regenerate user assignments when moving task workflow [SCI-6262] (#3668) 2021-11-16 11:10:15 +01:00
Oleksii Kriuchykhin 2e92500a73 Fix seeds to work with new UserRoles, fix Templates creation job [SCI-6270] 2021-11-15 21:36:06 +01:00
artoscinote 22623c821d
Fixed creating public projects on API, added missing translations [SCI-6167] (#3666) 2021-11-15 15:36:38 +01:00
aignatov-bio 8f9ab4f6c3
Refactor permissions breadcrumbs for users [SCI-6260] (#3665) 
* Refactor permissions breadcrumbs for users [SCI-6260]

* Change creator assignments to automatically [SCI-6260]

Co-authored-by: Anton <anton@scinote.net>
 2021-11-15 15:02:22 +01:00
artoscinote 945fd31538
Move modal copy and design fix [SCI-6248] (#3663) 2021-11-15 12:50:50 +01:00
artoscinote 4ce0c53d36
Implemented reset role functionality [SCI-6261] (#3662) 
* Implemented reset role functionality [SCI-6261]

* Linter fixes [SCI-6261]
 2021-11-15 11:12:31 +01:00
artoscinote a6c61c2b4e
Fixed permission issues when moving experiment [SCI-6257] (#3655) 
* Fixed permission issues when moving experiment [SCI-6257]

* Copy fixes [SCI-6248]

* Use canaid helper instead of permission_granted [SCI-6257]

* Fixes [SCI-6257]
 2021-11-12 12:59:49 +01:00
Alex Kriuchykhin 1c3a2aa0a7
Fix permissions checks in recent work service [SCI-6253] (#3654) 2021-11-12 11:13:43 +01:00
Alex Kriuchykhin b73cd5c31e
Allow admins to change own roles on projects [SCI-6250] (#3653) 2021-11-12 11:13:30 +01:00
artoscinote 740413fb3a
Stop role update propagation at manually assigned resources [SCI-6259] (#3659) 2021-11-12 11:12:06 +01:00
Alex Kriuchykhin ba96bd497c
Merge pull request #3658 from okriuchykhin/ok_SCI_6254 
Fix activities for assigning to experiments and tasks [SCI-6254]
 2021-11-12 10:11:55 +01:00
aignatov-bio 9dc7b31cbd
Hide checkbox if user doesnt have restore permission [SCI-6258] (#3657) 
Co-authored-by: Anton <anton@scinote.net>
 2021-11-12 10:04:26 +01:00
Oleksii Kriuchykhin f73f9dd2c1 Fix activities for assigning to experiments and tasks [SCI-6254] 2021-11-11 21:30:30 +01:00
aignatov-bio 50e93fed4e
Remove load from file button from bioeddie [SCI-6091] (#3656) 
Co-authored-by: Anton <anton@scinote.net>
 2021-11-11 14:07:27 +01:00
Alex Kriuchykhin eb8de58c97
Allow team admins to manage users on projects [SCI-6250] (#3650) 2021-11-10 14:47:05 +01:00
artoscinote 9181be22c8
Also delete user_my_modules when deleting MyModule assignments [SCI-6252] (#3651) 2021-11-10 14:45:24 +01:00
Martin Artnik 9e7eee5f2c Fixed to use .update! [SCI-6128] 2021-11-10 11:55:38 +01:00
Martin Artnik 68362bcb9c Fix experiment move service [SCI-6128] 2021-11-10 11:46:48 +01:00
artoscinote 9f92cfab1a
Fixed access modal styling issues [SCI-6241] (#3646) 
* Fixed access modal styling issues [SCI-6241]

* Refactor user access list to use flex [SCI-6241]

* Linter fixes [SCI-6241]
 2021-11-10 11:40:41 +01:00
artoscinote 0eacb91bed
Renamed 'group_user_role', fixed public project migration [SCI-6234] (#3642) 
* Renamed 'group_user_role', fixed public project migration [SCI-6234]

* Moved public project update inside loop [SCI-6234]
 2021-11-10 09:52:37 +01:00
aignatov-bio dfa79c6996
Fix duplicate requests for project user manage modal [SCI-6249] (#3647) 
Co-authored-by: Anton <anton@scinote.net>
 2021-11-09 16:16:10 +01:00
aignatov-bio 3372b679da
Change role assigning role on object creation [SCI-6247] (#3645) 
Co-authored-by: Anton <anton@scinote.net>
 2021-11-09 16:10:43 +01:00
aignatov-bio 3862e780ee
Fix error on experiments page after role update [SCI-6245] (#3644) 
Co-authored-by: Anton <anton@scinote.net>
 2021-11-09 16:10:20 +01:00
artoscinote 083efd77fd
Generalize user role propagation job [SCI-6246] (#3649) 2021-11-09 16:09:12 +01:00
Alex Kriuchykhin 9a967cfe40
Fix user removal from the team [SCI-6201] (#3637) 2021-11-09 09:35:36 +01:00
artoscinote dcdd9ece13
Fixed docx report image generation [SCI-6203] (#3639) 
* Fixed docx report image generation [SCI-6203]

* Added error logging for docx image render error [SCI-6203]
 2021-11-09 09:35:02 +01:00
aignatov-bio c8fd0dce51
Add permission checks for bmt filters [SCI-6099] (#3622) 
Co-authored-by: Anton <anton@scinote.net>
 2021-11-09 09:28:51 +01:00
aignatov-bio d3e178e5a2
Small CSS fixes for permissions [SCI-6207] (#3638) 
Co-authored-by: Anton <anton@scinote.net>
 2021-11-09 09:26:22 +01:00
Alex Kriuchykhin 542d432581
Merge pull request #3625 from aignatov-bio/ai-sci-6085-add-scrollbar-to-filters-dropdown 
Add scrollbars to filters dropdown [SCI-6085]
 2021-11-08 21:03:01 +01:00
Alex Kriuchykhin f11a4701d0
Merge pull request #3629 from artoscinote/ma_SCI_6193 
Added optional webhook secret key [SCI-6193]
 2021-11-08 21:00:40 +01:00
Alex Kriuchykhin 7d92e3c8e0
Merge pull request #3641 from artoscinote/ma_SCI_6239 
Fixed removal of user from team [SCI-6239]
 2021-11-08 20:56:59 +01:00
Martin Artnik 81e7b80bae Fixed removal of user from team [SCI-6239] 2021-11-08 16:06:28 +01:00
Alex Kriuchykhin 0a8af99368
Merge pull request #3627 from okriuchykhin/ok_SCI_6184 
Add support of Okta SSO provider [SCI-6184]
 2021-11-08 15:01:16 +01:00
artoscinote 3e3e2cc24e
Revert "Implement experiment and task access removal" [SCI-6218] (#3635) 
* Revert "Implement experiment and task access removal [SCI-6156] (#3614)"

This reverts commit 2abefd78e6.

* Rename assign to module activity to designate to my module [SCI-6218]
 2021-11-05 15:44:14 +01:00
aignatov-bio b0c031e4e3
Fix duplicate assignment modals (#3636) 
Co-authored-by: Anton <anton@scinote.net>
 2021-11-05 15:42:59 +01:00
artoscinote e3d08db6de
Fixed viewable projects scope in reports controller [SCI-6200] (#3634) 2021-11-05 14:31:05 +01:00
artoscinote ba5403ab5e
Fixed activities service for singular relations (asset/result) [SCI-6204] (#3633) 2021-11-04 14:20:51 +01:00
artoscinote 33190e4582
Fixed typo in project overview service [SCI-6199] (#3632) 2021-11-04 14:20:42 +01:00
aignatov-bio 5081e90fd6
Close access grant modal after submit [SCI-6205] (#3631) 
Co-authored-by: Anton <anton@scinote.net>
 2021-11-04 13:31:58 +01:00
aignatov-bio 1ef9ea2cbb
Fix roles permission and helper [SCI-6198][SCI-6181] (#3630) 
Co-authored-by: Anton <anton@scinote.net>
 2021-11-04 13:29:34 +01:00
Martin Artnik 3406cd9235 Added optional webhook secret key [SCI-6193] 2021-11-03 15:04:13 +01:00
Martin Artnik 2f56e25346 Close saved filters dropdown on outclick [SCI-6086] 2021-11-02 16:23:08 +01:00
Oleksii Kriuchykhin 47b8347ce6 Add support of Okta SSO provider [SCI-6184] 2021-11-02 16:19:56 +01:00
Anton f7d1541e01 Add scrollbars to filters dropdown [SCI-6085] 2021-11-02 12:18:00 +01:00
aignatov-bio 6dea5f17ff
Fix bioEddie initialization [SCI-6196] (#3624) 
Co-authored-by: Anton <anton@scinote.net>
 2021-11-02 10:26:01 +01:00
Oleksii Kriuchykhin a99599efea Merge branch 'features/new_permissions' into develop 2021-10-29 15:16:30 +02:00
aignatov-bio 3ec49ec1a3
Fix helpers for designated users (#3621) 
Co-authored-by: Anton <anton@scinote.net>
 2021-10-29 12:49:38 +02:00
artoscinote 1bb30b2c49
Also move activities when moving experiment to another project [SCI-6047] (#3535) 
* Also move activities when moving experiment to another project [SCI-6047]

* Changed update to update! [SCI-6047]
 2021-10-28 16:35:47 +02:00
artoscinote 2abefd78e6
Implement experiment and task access removal [SCI-6156] (#3614) 2021-10-28 16:32:05 +02:00
artoscinote 6f2d883706
Added permissions specs for API, minor changes to permissions [SCI-6152] (#3609) 2021-10-28 14:48:28 +02:00
Alex Kriuchykhin 047f47a46a
Merge pull request #3617 from aignatov-bio/ai-sci-6181-update-permissions-on-task 
Small fixes on task permissions [SCI-6181]
 2021-10-28 14:46:57 +02:00
Alex Kriuchykhin 17a4afc6fa
Merge pull request #3607 from okriuchykhin/ok_SCI_6142 
Change the assets URL returned by API to pre-signed url [SCI-6142]
 2021-10-28 14:32:47 +02:00
Alex Kriuchykhin f8e433a0ca
Merge branch 'features/new_permissions' into ok_SCI_6151 2021-10-28 14:31:47 +02:00
aignatov-bio 992d3bffa3
small permissions interface updates [SCI-6145] (#3620) 
Co-authored-by: Anton <anton@scinote.net>
 2021-10-28 13:58:31 +02:00
Alex Kriuchykhin 1bde37db78
Merge branch 'develop' into ok_SCI_5579 2021-10-28 13:26:27 +02:00
Oleksii Kriuchykhin b1b7dbb8ef Improve code style [SCI-6151] 2021-10-28 12:58:42 +02:00
artoscinote fc866640be
Improved/removed annoying reloads when managing user access [SCI-6170] (#3618) 2021-10-28 12:49:26 +02:00
Oleksii Kriuchykhin 2fb71aa312 Add API endpoint for Cloning Experiments [SCI-6088] 2021-10-28 12:28:46 +02:00
artoscinote 98be1ae0ff
Added link to task access to task screen [SCI-6157] (#3615) 2021-10-28 10:45:34 +02:00
aignatov-bio 9e3d64bbb6
Fix projects list in clone experiment dropdowns [SCI-6139] (#3592) 
Co-authored-by: Anton <anton@scinote.net>
 2021-10-27 13:55:49 +02:00
aignatov-bio 22034089a6
Update experiment move service [SCI-6149] (#3599) 
* Update experiment move service [SCI-6149]

* Move permission check to helper [SCI-6149]

Co-authored-by: Anton <anton@scinote.net>
 2021-10-27 13:48:52 +02:00
Anton 5d517fc2b8 Small fixes on task permissions [SCI-6181] 2021-10-27 11:41:47 +02:00
aignatov-bio d4756be38a
Fix typo on users manage list [SCI-5021] (#3613) 
Co-authored-by: Anton <anton@scinote.net>
 2021-10-26 16:02:24 +02:00
aignatov-bio 7d6136435d
Change my_module owner after copy [SCI-6176] (#3611) 
Co-authored-by: Anton <anton@scinote.net>
 2021-10-26 12:06:35 +02:00
aignatov-bio 1a05c3a40c
Update canvas task cards [SCI-5021] (#3608) 
Co-authored-by: Anton <anton@scinote.net>
 2021-10-26 12:06:26 +02:00
Alex Kriuchykhin f6a30cac6c
Merge pull request #3593 from okriuchykhin/ok_SCI_6134 
Change Dashboard::RecentWorkService to use new user roles [SCI-6134]
 2021-10-26 11:43:54 +02:00
aignatov-bio aa4b765407
Update assign/unassign rows to task [SCI-6150] (#3604) 
Co-authored-by: Anton <anton@scinote.net>
 2021-10-26 11:41:08 +02:00
aignatov-bio edb09dd099
Update copy experiment permission checks [SCI-6147] (#3598) 
Co-authored-by: Anton <anton@scinote.net>
 2021-10-26 11:40:54 +02:00
artoscinote 80b5018337
Change designated users permission check [SCI-6177] (#3610) 2021-10-26 11:29:57 +02:00
Alex Kriuchykhin ac176f6c9e
Merge pull request #3596 from okriuchykhin/ok_SCI_6113 
Add user roles to team importer/exporter [SCI-6113]
 2021-10-25 14:06:17 +02:00
Oleksii Kriuchykhin 38b107b336 Change the assets URL returned by API to pre-signed url [SCI-6142] 2021-10-22 13:48:06 +02:00
Oleksii Kriuchykhin 2051ea5360 Update the search to abide the permissions [SCI-6151] 2021-10-22 11:43:20 +02:00
Alex Kriuchykhin bd9b12b377
Merge pull request #3603 from artoscinote/ma_SCI_6169 
Fixed updating user assignment in MyModuleMember [SCI-6169]
 2021-10-22 10:05:19 +02:00
Alex Kriuchykhin 7819cfb280
Merge pull request #3602 from artoscinote/ma_SCI_6159 
Enabled experiment dropdown for viewers to view ID and members [SCI-6159
 2021-10-22 10:04:40 +02:00
artoscinote 0c8614c9ac
Remove caching from user access modals [SCI-6163] (#3600) 2021-10-22 10:03:52 +02:00
Martin Artnik 6249465b34 Fixed updating user assignment in MyModuleMember [SCI-6169] 2021-10-21 15:51:17 +02:00
Martin Artnik f43457012c Enabled experiment dropdown for viewers to view ID and members [SCI-6159 2021-10-20 16:59:33 +02:00
artoscinote 35eb7bffdd
Fixed to use correct users relation in access modals [SCI-6164] (#3601) 2021-10-20 15:49:03 +02:00
artoscinote 3746332c30
Fixed cached user lists when changing assignments [SCI-6137] (#3597) 
Fixed cache invalidation for assignables, current_user missing in cache keys [SCI-6137]
 2021-10-19 16:00:52 +02:00
Oleksii Kriuchykhin b10a6c8b7d Add user roles to team importer/exporter [SCI-6113] 2021-10-14 13:21:36 +02:00
artoscinote c63090da8c
Fixed scopes and added permission checks to quick create services [SCI-6135] (#3584) 2021-10-14 13:13:29 +02:00
Anton 451eb97657 Fix bio eddie iframe loading [SCI-6001] 2021-10-14 13:10:11 +02:00
Zmago Devetak 4a4c344a3a
Task UX: Update assigning a Task to user(s) (#3429) 
* add dynmic select for user assignment on task

* update the user assignment so it looks like tags picker

* fix code style

* Code style fixes [SCI-5871]

* Code style fixes [SCI-5871]

* Destroy and search action fixes [SCI-5871]

Co-authored-by: Martin Artnik <martin@scinote.net>
 2021-10-14 11:49:27 +02:00
aignatov-bio 69a3c5f5ec
Fix results comments permission helper [SCI-6146] (#3594) 
Co-authored-by: Anton <anton@scinote.net>
 2021-10-14 11:48:09 +02:00
Alex Kriuchykhin ed27197f83
Merge pull request #3590 from okriuchykhin/ok_SCI_6124 
Fix user removal from a team [SCI-6124]
 2021-10-13 15:08:58 +02:00
Oleksii Kriuchykhin bc806f0c86 Change Dashboard::RecentWorkService to use new user roles [SCI-6134] 2021-10-13 14:12:24 +02:00
Martin Artnik 6ea34adb22 Fixed designated users relation 2021-10-13 13:39:28 +02:00
artoscinote 5bda5acebc
Fixed the rule for moving experiment [SCI-6128] (#3587) 2021-10-13 13:32:11 +02:00
artoscinote 25abee536c
Default to viewer role in new project modal [SCI-6131] (#3586) 2021-10-13 10:10:34 +02:00
artoscinote 92fab5dd4f
Update usage of user_my_modules [SCI-6121] (#3585) 2021-10-13 10:10:14 +02:00
aignatov-bio 328f1cfe4d
Add blank tasks to canvas [SCI-6133] (#3588) 2021-10-13 10:08:39 +02:00
artoscinote 462f8ffc47
Fixed unassigned user methods, order by name [SCI-6104] (#3589) 2021-10-13 09:50:06 +02:00
Oleksii Kriuchykhin d6cc800679 Fix user removal from a team [SCI-6124] 2021-10-12 17:00:03 +02:00
artoscinote 3c2275476f
Order experiments by name on move workflow modal [SCI-6048] (#3562) 2021-10-11 10:19:59 +02:00
artoscinote 362658021e
Permission typo fixes [SCI-6120] (#3582) 2021-10-11 10:19:16 +02:00
aignatov-bio 4705d09a96
Small permission fixes for controllers [SCI-6132] (#3581) 2021-10-08 12:43:26 +02:00
Martin Artnik c438b9a4e1 Fix duplicate public project assignments 2021-10-06 13:28:51 +02:00
artoscinote 0fe6cd66e5
Fix permission migration, fix assignable scope [SCI-6127] (#3580) 2021-10-05 13:45:52 +02:00
artoscinote 6fbb22922a
Fix project user assignment [SCI_5925] (#3577) 2021-10-05 13:45:34 +02:00
aignatov-bio c85f5187f3
Fix duplicarte results in activities filters [SCI-5948] (#3579) 2021-10-05 13:45:09 +02:00
artoscinote a18839f529
Automatically assign team admins as project owners [SCI_6119] (#3575) 2021-10-04 15:47:28 +02:00
aignatov-bio d594778fa8
Add project comment manage own permission [SCI-6115] (#3574) 2021-10-04 15:43:50 +02:00
aignatov-bio 116c09cd8a
Update users selection for notifications [SCI-6110] (#3573) 2021-10-04 15:43:28 +02:00
aignatov-bio 982aaf887c
Fix duplicate objects on dashboard [SCI-5948] (#3576) 2021-10-04 15:41:35 +02:00
artoscinote 75d6a17cb7
Fix ProjectOverviewService and automatic project assignment [SCI_6117] (#3572) 2021-10-04 11:20:47 +02:00
aignatov-bio 34b0aec5b7
Update permission checks for reports [SCI-6105] (#3570) 2021-10-01 14:25:52 +02:00
aignatov-bio 3eb2c98cce
Update render permission for smart annotation [SCI-6112] (#3571) 2021-10-01 14:23:29 +02:00
artoscinote 63923f0e63
Skip inaccessible elements when generating reports [SCI-6109] (#3569) 2021-10-01 14:18:40 +02:00
Martin Artnik 4f4ab05740 Fix project search in quick start controller [SCI-5915] 2021-10-01 12:20:51 +02:00
Martin Artnik 1d20258a2e Fix typo [SCI-5924] 2021-10-01 12:20:51 +02:00
Alex Kriuchykhin 1233c9bc74
Add missing permission helper for folder deletion [SCI-6114] (#3568) 2021-10-01 10:47:32 +02:00
Oleksii Kriuchykhin d21dd191a6 Confirm the invitation when user is invited and lands in with SSO [SCI-6055] 2021-09-30 17:06:45 +02:00
Martin Artnik bf96f71531 Fix comment edit method [SCI_6054] 2021-09-30 14:12:12 +02:00
aignatov-bio dba6ed8515 Use default repository table state [SCI-6089] 2021-09-30 13:30:17 +02:00
artoscinote f68d724202
Rework experiment permissions [SCI-6054] (#3538) 
* Rework experiment permissions [SCI-6054]
 2021-09-30 11:32:11 +02:00
aignatov-bio a93f2889b7 Fix 2fa redirecting [SCI-6103] 2021-09-28 12:34:41 +02:00
aignatov-bio c248e87adb
Add permissions checks for results controllers [SCI-6071] (#3555) 
* Add permission tests for results controller [SCI-6071]

* Update results controllers with new permissions [SCI-6071]

* Small fixes to results controllers [SCI-6071]

* Update result permission helpers [SCI-6071]
 2021-09-24 13:11:41 +02:00
Alex Kriuchykhin 313eaf7276
Merge pull request #3539 from aignatov-bio/ai-sci-6050-fix-sidebar-navigation-for-archived-task 
Fix sidebar navigation for archived task [SCI-6050]
 2021-09-24 11:47:59 +02:00
Martin Artnik 49b9ee37cc Merge branch 'develop' into features/bmt-search 2021-09-24 11:01:27 +02:00
Oleksii Kriuchykhin f806a56cac Update existing roles with new permissions/abilities [SCI-6076] 2021-09-24 10:29:24 +02:00
Oleksii Kriuchykhin 607b7f76cf Update/implement permission checks in the my_modules_controller and my_modules_status_flow_controller [SCI-6061][SCI-6063] 2021-09-24 10:23:28 +02:00
aignatov-bio 4472eb1023
Fix docx preview render [SCI-6035] (#3559) 2021-09-24 10:01:55 +02:00
Alex Kriuchykhin 51e7f7668a
Merge pull request #3556 from okriuchykhin/ok_SCI_6062 
Update/implement permission checks in the _my_modules_tags_controller [SCI-6062]
 2021-09-23 17:23:22 +02:00
aignatov-bio 60b261feb8 Small fixes [SCI-6050] 2021-09-23 12:31:40 +02:00
artoscinote e57f5f8e26
Merge pull request #3551 from aignatov-bio/ai-sci-6065-update-my-module-comments-controller-permission 
Update permissions for my_module_comments controller [SCI-6065]
 2021-09-23 11:47:13 +02:00
aignatov-bio 6206f8a6e9 Update permissions for my_module_comments controller [SCI-6065] 2021-09-22 12:11:36 +02:00
Oleksii Kriuchykhin 5fb163c09a Update/implement permission checks in the _my_modules_tags_ controller [SCI-6062] 2021-09-21 16:21:55 +02:00
Miha Mencin 519dbe8fe9
Merge pull request #3554 from biosistemika/master 
Sept. hotfix
 2021-09-21 10:19:48 +02:00
aignatov-bio 78098f2d8c Add permission check for results download 2021-09-20 14:33:42 +02:00
aignatov-bio 250a018a4c Add permissions tests for my_module_repositories and my_module_repository_snapshots [SCI-6064] 2021-09-20 12:19:28 +02:00
Alex Kriuchykhin 0db9bf46ff
Merge pull request #3528 from okriuchykhin/ok_SCI_6036 
Prevent creation of duplicated repository cells [SCI-6036]
 2021-09-17 16:37:48 +02:00
artoscinote 895509a26c
Merge pull request #3543 from artoscinote/ma_SCI_6056 
Reworked MyModule permissions [SCI-6056]
 2021-09-17 15:19:01 +02:00
aignatov-bio a99f9db520
Small CSS fixes [SCI-6017][SCI-6019] (#3548) 2021-09-17 14:15:01 +02:00
aignatov-bio 857ce2d90f
Fix title for archived folders [SCI-6049] (#3541) 2021-09-17 14:12:53 +02:00
Martin Artnik 04413c6cc6 Make permission names consistent with spreadsheet [SCI-6056] 2021-09-17 10:41:28 +02:00
Oleksii Kriuchykhin 61d4a96a3f Update/implement permission checks in the experiments controller [SCI-6057] 2021-09-16 09:55:59 +02:00
artoscinote 95946499a5
Merge pull request #3544 from artoscinote/ma_SCI_5590 
Fixed HTML ampersand display issue [SCI-5590]
 2021-09-16 09:44:46 +02:00
Oleksii Kriuchykhin 0762323337 Update/implement permission checks in the project related controllers [SCI-6042] 2021-09-15 14:39:47 +02:00
Martin Artnik 534ab25e5d Sort experiments alphabetically in move task modal [SCI-6048] 2021-09-14 15:11:47 +02:00
Martin Artnik 77aa4a8534 Fixed HTML ampersand display issue [SCI-5590] 2021-09-14 14:42:18 +02:00
Alex Kriuchykhin 41e41f790b
Merge pull request #3531 from aignatov-bio/ai-sci-6034-change-printing-status-modal-logic 
Change printing status modal logic [SCI-6034]
 2021-09-14 11:17:17 +02:00
Alex Kriuchykhin 8a1454ddea
Merge pull request #3517 from artoscinote/ma_SCI_6013 
Experiment dropdown layout fixes [SCI-6013]
 2021-09-14 11:16:16 +02:00
Martin Artnik e8f57e9e99 Reworked MyModule permissions [SCI-6056] 2021-09-14 11:08:35 +02:00
Alex Kriuchykhin 3ca593d7f9
Merge pull request #3513 from okriuchykhin/ok_SCI_5663 
Allow project management to it's creator if project has no assigned users [SCI-5663]
 2021-09-14 11:08:25 +02:00
Alex Kriuchykhin 809941d8d1
Merge pull request #3518 from okriuchykhin/ok_SCI_5848 
Add error message in report in case of file preview generation failure [SCI-5848]
 2021-09-14 11:08:03 +02:00
aignatov-bio 6a1223c498 Fix sidebar navigation for archived task [SCI-6050] 2021-09-10 12:05:40 +02:00
aignatov-bio 3036a38bfd
Fix rspec tests [SCI-6044] (#3537) 2021-09-09 15:41:42 +02:00
Oleksii Kriuchykhin e8e1ee3011 Prevent creation of duplicated repository cells [SCI-6036] 2021-09-09 14:24:35 +02:00
Alex Kriuchykhin a93ca08db3
Merge pull request #3532 from okriuchykhin/ok_SCI_6010 
Fix BMT base URL path in requests [SCI-6010]
 2021-09-07 16:30:21 +02:00
Oleksii Kriuchykhin 7041cc19af Fix BMT base URL path in requests [SCI-6010] 2021-09-07 16:28:14 +02:00
Martin Artnik 8c864c65e5 Fix syntax error 2021-09-07 13:27:32 +02:00
aignatov-bio 6484dfe630 Change printing status modal logic [SCI-6034] 2021-09-07 12:28:11 +02:00
Alex Kriuchykhin 268b8d6bf1
Merge pull request #3530 from artoscinote/ma_SCI_6041 
Update project permission helpers [SCI-6041]
 2021-09-07 12:28:00 +02:00
Alex Kriuchykhin fdbeedd5e6
Merge pull request #3520 from okriuchykhin/ok_SCI_5920 
Allow project viewing for team admins [SCI-5920]
 2021-09-07 12:19:17 +02:00
Oleksii Kriuchykhin 3cab5751e7 Add rake task for creation and syncing structure of BMT inventory [SCI-6010] 2021-09-07 12:17:09 +02:00
Martin Artnik 975a8910a8 Updated project permission helpers [SCI-6041] 2021-09-07 11:27:52 +02:00
Martin Artnik ade1385392 Merge branch 'develop' into features/bmt-search 2021-09-06 10:51:04 +02:00
Martin Artnik 7e6ca3be8a Merge branch 'develop' into features/new_permissions 2021-09-06 10:33:32 +02:00
aignatov-bio ccc2964aff
Add error message on empty BioEddie save [SCI-5993] (#3526) 2021-09-06 10:13:30 +02:00
Martin Artnik 206ba3d79c Reworked how search error works with repository table [SCI-5961] 2021-09-06 10:12:10 +02:00
Martin Artnik ca6dfa2541 Display dropdown item info border using CSS [SCI-6013] 2021-09-02 12:58:25 +02:00
Martin Artnik 35e815449d Experiment dropdown layout fixes [SCI-6013] 2021-09-02 12:42:06 +02:00
Martin Artnik 3a70aadea4 Added specific html class to printer settings section [SCI-6039] 2021-09-02 09:52:52 +02:00
artoscinote 35874d6a93
Merge pull request #3521 from artoscinote/ma_SCI_6022 
Fix barcode scanning in modals [SCI-6022]
 2021-08-31 14:37:39 +02:00
Martin Artnik 73241e87bb Fix barcode scanning in modals [SCI-6022] 2021-08-31 14:37:02 +02:00
Oleksii Kriuchykhin f591bac3b1 Allow project viewing for team admins [SCI-5920] 2021-08-31 14:21:02 +02:00
artoscinote 19a499b613
Merge pull request #3519 from artoscinote/ma_SCI_6022 
Made barcode search globally available [SCI-6022]
 2021-08-30 15:39:20 +02:00
Alex Kriuchykhin a63f047ae7
Merge pull request #3512 from okriuchykhin/ok_SCI_6031 
Add configuration variable for webhooks, disable by default [SCI-6031]
 2021-08-30 15:35:38 +02:00
Martin Artnik 6d92af4b2f Made barcode search globally available [SCI-6022] 2021-08-30 14:41:31 +02:00
Oleksii Kriuchykhin b32477a933 Add error message in report in case of file preview generation failure [SCI-5848] 2021-08-30 14:18:31 +02:00
Miha Mencin 50d33896e3
Merge pull request #3480 from artoscinote/ma_SCI_5963 
Downcase all user emails, downcase when finding user [SCI-5963]
 2021-08-30 13:00:12 +02:00
Martin Artnik 5f21e3296e Added error message on search failure [SCI-5961] 2021-08-30 12:02:02 +02:00
Martin Artnik e08b406185 Added additionalDataFilter [SCI-6026] 2021-08-30 10:49:15 +02:00
Martin Artnik 896f0ce1e3 Implemented applying BMT filters [SCI-5980] 2021-08-30 10:49:15 +02:00
aignatov-bio b269f3f612 Add saved filters backend [SCI-5977] (#3509) 
* Add saved filters backend [SCI-5977]

* Rework filter saving [SCI-5977]

Co-authored-by: Martin Artnik <martin@scinote.net>
 2021-08-30 10:49:15 +02:00
artoscinote ef0e45be04 Implemented frontend for BMT-type repository [SCI-5991] (#3503) 
* Implemented frontend for BMT-type repository [SCI-5991]

* Refactor repository view, fix column reordering [SCI-5991]

* Remove type mapping for default columns in column management [SCI-5991]

* Repository table partial fix, remove non-relevant migration [SCI-5991]
 2021-08-30 10:49:15 +02:00
aignatov-bio 90d4a5f7d1 Add save bmt filters front end [SCI-5962] (#3505) 2021-08-30 10:49:15 +02:00
Oleksii Kriuchykhin d4ef2b1bd4 Add BMT inventory model [SCI-6009] 2021-08-30 10:49:15 +02:00
Martin Artnik a872ea8a47 CSS fixes [SCI-5956] 2021-08-30 10:49:15 +02:00
Martin Artnik 9a87bad740 Implement filters and JSON building [SCI-5956] 2021-08-30 10:49:15 +02:00
Oleksii Kriuchykhin 0b74f34de7 Add external IDs to repositories [SCI-5990] 2021-08-30 10:49:14 +02:00
aignatov-bio 958ee92db7 Add BMT filters interactions [SCI-5955] (#3478) 
* Add BMT filters interactions [SCI-5955]

* Small fixes [SCI-5955]
 2021-08-30 10:49:14 +02:00
aignatov-bio 1929959038 Add dropdown for btm filters [SCI-5953] (#3469) 2021-08-30 10:49:14 +02:00
artoscinote afc74b6b8f
Merge pull request #3500 from artoscinote/ma_SCI_6014 
Added edit activities on asset deletion [SCI-6014]
 2021-08-30 10:00:58 +02:00
Oleksii Kriuchykhin 4665743d02 Allow project management to it's creator if project has no assigned users [SCI-5663] 2021-08-26 16:56:21 +02:00
Martin Artnik 1b26a4f65a Added access token to protocols.io requests [SCI-5968] 2021-08-26 15:26:35 +02:00
Oleksii Kriuchykhin d67f7691a1 Add configuration variable for webhooks, disable by default [SCI-6031] 2021-08-26 14:08:15 +02:00
artoscinote 295d27f0d7
Added option to override default OTP drift time [SCI-6027] (#3507) 2021-08-25 14:02:25 +02:00
Martin Artnik 56fa07aa21 Moved max item name length to constant [SCI-6025] 2021-08-24 10:19:30 +02:00
Martin Artnik 289095ecbc Amended label template, truncate item name before print [SCI_6025] 2021-08-24 09:52:29 +02:00
aignatov-bio 7621deeb2a
Small label printers fixes [SCI-6021][SCI-6024] (#3502) 2021-08-23 13:58:16 +02:00
Martin Artnik b46df537d5 Added edit activities on asset deletion [SCI-6014] 2021-08-20 14:45:33 +02:00
aignatov-bio 546b108bd2
Fix webhooks page for user without teams [SCI-6016] (#3498) 2021-08-20 13:14:24 +02:00
artoscinote 5856778e69
Merge pull request #3494 from aignatov-bio/ai-sci-6018-fix-edit-icon-for-bioeddie 
Add edit bio eddie button to asset card [SCI-6018]
 2021-08-20 11:06:17 +02:00
artoscinote c89384cf3c
Merge pull request #3495 from aignatov-bio/ai-sci-6015-clear-errors-on-new-webhook 
Clear errors on cancel new webhook form [SCI-6015]
 2021-08-20 11:05:44 +02:00
artoscinote c977decd8a
Merge pull request #3496 from aignatov-bio/ai-sci-5950-fix-webhook-position-in-menu 
Fix webhook sidebar position and fix texting in inventory [SCI-5950]
 2021-08-20 11:05:15 +02:00
aignatov-bio dc192ddbfb Fix webhook sidebar position and fix texting in invnetory [SCI-5950] 2021-08-19 14:23:53 +02:00
aignatov-bio 1b44d49983 Clear errors on cancel new webhook form [SCI-6015] 2021-08-19 13:42:42 +02:00
aignatov-bio 5ed4d9e65e Add edit bio eddie button to asset card [SCI-6018] 2021-08-19 13:28:35 +02:00
aignatov-bio bbb6cd226b
Add permission check for webhooks sidebar button [SCI-6016] (#3493) 2021-08-19 12:04:52 +02:00
aignatov-bio a61446acf5
Add close button to label printer modal [SCI-6000] (#3492) 2021-08-19 12:04:41 +02:00
Alex Kriuchykhin 5fa3fa4601
Merge pull request #3491 from okriuchykhin/ok_SCI_5983 
Add timestamps to API serializers, allow inclusion of comments [SCI-5983]
 2021-08-19 10:43:02 +02:00
artoscinote 80dfb04976
Merge pull request #3485 from okriuchykhin/ok_SCI_6002 
Fix permission checks in reports controller [SCI-6002]
 2021-08-18 15:27:49 +02:00
Martin Artnik 403bce6f5f Fixed creating notifications when users are inactive [SCI-5938] 2021-08-18 10:45:29 +02:00
Oleksii Kriuchykhin 33d37d048e Add timestamps to API serializers, allow inclusion of comments [SCI-5983] 2021-08-18 10:00:01 +02:00
aignatov-bio 6e1d51e2f3
Fix bioeddie errors in console [SCI-5989] (#3487) 2021-08-16 18:29:55 +02:00
artoscinote 6f0a65f02f
Merge pull request #3484 from artoscinote/ma_SCI_5999 
Rework molecule registration activities [SCI-5999]
 2021-08-16 14:33:24 +02:00
Martin Artnik 5cc966e11e Remove delete molecule activities [SCI-5999] 2021-08-16 13:58:54 +02:00
aignatov-bio 852d2cc03c
CSS fixes for webhooks and barcodes [SCI-5972][SCI-5988][SCI-5969][SCI-5970] (#3486) 
* CSS fixes for webhooks and barcodes [SCI-5972][SCI-5988][SCI-5969][SCI-5970]

* Small fixes [SCI-5972]
 2021-08-16 10:51:46 +02:00
Oleksii Kriuchykhin 2daacdf62c Fix permission checks in reports controller [SCI-6002] 2021-08-13 16:32:02 +02:00
Martin Artnik 56576960b0 Rework molecule registration activities [SCI-5999] 2021-08-13 15:15:45 +02:00
artoscinote 12bb44147c
Merge pull request #3482 from artoscinote/ma_SCI_5984 
Optimize how printing jobs and statuses work [SCI-5984]
 2021-08-13 09:25:42 +02:00
Martin Artnik 1d3e0db904 Optimize how printing jobs and statuses work [SCI-5984] 2021-08-12 16:57:25 +02:00
aignatov-bio 87416470f1
Fix empty state for bioEddie [SCI-5987] (#3481) 2021-08-12 15:20:21 +02:00
Martin Artnik 1db06b46f7 Fixed for assets that belong to protocol step [SCI-5996] 2021-08-12 13:45:38 +02:00
artoscinote a65d8ad365
Merge pull request #3477 from artoscinote/ma_SCI_5985 
Fixed handling deletion for asset activity display [SCI-5985]
 2021-08-12 12:23:23 +02:00
Martin Artnik c3fef50d3e Fixed handling deletion for asset activity display [SCI-5985] 2021-08-12 12:18:12 +02:00
artoscinote ad179298fc
Merge pull request #3476 from artoscinote/ma_SCI_5985 
Fixed registering bioeddie molecule on step [SCI-5985]
 2021-08-11 14:12:38 +02:00
Martin Artnik 143e491016 Fixed registering bioeddie molecule on step [SCI-5985] 2021-08-11 14:10:05 +02:00
artoscinote 67330ab27f
Merge pull request #3475 from artoscinote/ma_SCI_5979 
Fix disabled refresh printers button [SCI-5979]
 2021-08-11 13:22:51 +02:00
Martin Artnik 5d5f406e9a Downcase all user emails, downcase when finding user [SCI-5963] 2021-08-11 13:18:58 +02:00
Martin Artnik 9a8a9c7b34 Fix disabled refresh printers button [SCI-5979] 2021-08-11 12:23:18 +02:00
artoscinote 1fc9027d1a
Merge pull request #3466 from aignatov-bio/ai-sci-5964-cancel-changes-after-exit-webhook-edit-mode 
Cancel changes after exit webhook edit mode [SCI-5964]
 2021-08-11 12:14:12 +02:00
aignatov-bio 5eb2c4a28b
Fix image extension in empty printers modal [SCI-5971] (#3470) 2021-08-11 11:43:16 +02:00
Martin Artnik 861be4bb35 Fix issues with BioEddie integration [SCI-5982] 2021-08-11 09:50:00 +02:00
Martin Artnik 8f3f39f7c7 Fixed handling of activity subject parents when matching activity filters [SCI-5973] 2021-08-06 13:43:30 +02:00
aignatov-bio cfa7937f88 Cancel changes after exit webhook edit mode [SCI-5964] 2021-08-05 12:44:01 +02:00
Martin Artnik 024f9117e6 fix failing specs 2021-08-03 14:16:22 +02:00
Martin Artnik 57d5e6c2a7 Merge branch 'develop' into features/barcodes 2021-08-03 13:36:36 +02:00
artoscinote f839cb5256
Merge pull request #3464 from biosistemika/features/bioeddie-integration 
Features/bioeddie integration
 2021-08-03 13:32:53 +02:00
artoscinote f24207588c
Merge pull request #3463 from biosistemika/features/webhooks 
Features/webhooks
 2021-08-03 13:32:12 +02:00
artoscinote c41247a5fd
Merge pull request #3439 from artoscinote/ma_SCI_5879 
Implement Save & Register molecule [SCI-5879]
 2021-08-03 12:15:46 +02:00
Martin Artnik 13ddff89a8 Fixed Asset relation handling in activities [ma_SCI_5789] 2021-08-03 09:59:06 +02:00
Martin Artnik a82af505eb Merge branch 'develop' into features/webhooks 2021-08-02 16:22:52 +02:00
artoscinote fe43017ba4
Merge pull request #3445 from artoscinote/ma_SCI_5898 
Fixed UX issues in user invites modal [SCI-5898]
 2021-08-02 15:58:16 +02:00
Martin Artnik a19f109e65 Add printer description [SCI-5942] 2021-08-02 15:50:26 +02:00
Martin Artnik ae174b276a Code review fixes and error handling improvements [SCI-5942] 2021-08-02 15:42:53 +02:00
Martin Artnik 123e415a4f Print status backend + FE integration [SCI-5942] 2021-08-02 15:42:53 +02:00
aignatov-bio 43571b5692
Print labels changes [SCI-5943] (#3461) 2021-08-02 15:38:37 +02:00
aignatov-bio a782ce50d1
Add bio eddie files to export all [SCI-5877] (#3426) 2021-08-02 13:27:02 +02:00
Martin Artnik e63a665140 Merge branch 'develop' into features/barcodes 2021-08-02 11:15:48 +02:00
Martin Artnik 0f417f9730 Merge branch 'develop' into features/barcodes 2021-07-29 13:32:17 +02:00
artoscinote 3649e2fbe0
Merge pull request #3457 from artoscinote/ma_SCI_5903 
Added print job queue system, job status endpoint [SCI-5903]
 2021-07-29 13:06:34 +02:00
aignatov-bio 02408ae885
Add printing status modal [SCI-5910] (#3454) 2021-07-29 12:24:46 +02:00
artoscinote 21d780e4ca
Merge pull request #3446 from artoscinote/ma_SCI_5893 
Fix style of experiment id in dropdown [SCI-5893]
 2021-07-29 11:44:52 +02:00
Martin Artnik 5c4f923854 Corrected type for 'assignment' activities [SCI-5662] 2021-07-29 10:13:28 +02:00
Martin Artnik 67f4e81a3a Merge branch 'develop' into features/new_permissions 2021-07-28 15:16:47 +02:00
Martin Artnik b41ee028ca Added overridable send permission method to notifications [SCI-5938] 2021-07-28 13:14:07 +02:00
aignatov-bio a54f36a486
Add empty state for barcode printers [SCI-5935] (#3455) 2021-07-28 11:12:46 +02:00
aignatov-bio 8d033274e4
Add barcode scanners support [SCI-5929] (#3456) 2021-07-27 22:01:08 +02:00
Martin Artnik 3f2a294cdc Added wait for printer ready state in print job [SCI-5903] 2021-07-27 16:09:23 +02:00
Martin Artnik e57132dbd0 Added print job queue system, job status endpoint [SCI-5903] 2021-07-27 15:26:18 +02:00
artoscinote 46a9388d8d
Merge pull request #3451 from artoscinote/ma_SCI_5911 
Implemented printer management [SCI-5911]
 2021-07-27 13:19:13 +02:00
aignatov-bio d373c174ee
Add print label button to repository toolbar (#3453) 2021-07-27 12:34:13 +02:00
Martin Artnik 53e072f79e Added error handling to API wrapper [SCI-5939] 2021-07-27 10:36:06 +02:00
Martin Artnik 61919e81b6 Remove FLUICS API client hack [SCI-5939] 2021-07-27 09:41:51 +02:00
Martin Artnik 110ddd872e Added placeholder FLUICS printer setup 2021-07-23 14:56:21 +02:00
Martin Artnik b32b207f3d Added FLUICS API client [SCI-5939] 2021-07-23 13:52:28 +02:00
Oleksii Kriuchykhin c26dcf4b23 Replace empty? with blank? [SCI-5579] 2021-07-23 11:56:28 +02:00
Martin Artnik 662370d2bd Removed auto-disable, fixed ActiveJob + DelayedJob retry handling [SCI-5800] 2021-07-22 13:43:36 +02:00
Martin Artnik 4bb080c25b Merge migrations, code fixes [SCI-5800] 2021-07-22 10:51:03 +02:00
Martin Artnik 04b94d504d Moved activity logging to controller [SCI-5879] 2021-07-22 09:52:04 +02:00
Martin Artnik d54a743e64 Fixed handling of dropdown-selector max height [SCI-5898] 2021-07-22 09:37:25 +02:00
aignatov-bio d4f974ac64
Add inline editing for folder name [SCI-5896] (#3430) 2021-07-21 21:33:13 +02:00
aignatov-bio 7b0ea6f701
Show experiment id for users with read only permission [SCI-5895] (#3434) 2021-07-21 21:33:00 +02:00
aignatov-bio be777a8919
Add barcodes to repository item card [SCI-5883][SCI-5884] (#3447) 
* Add barcodes to repository item card [SCI-5883][SCI-5884]

* Fix markup [SCI-5883]
 2021-07-21 21:32:42 +02:00
artoscinote 7551432687
Merge pull request #3443 from artoscinote/ma_SCI_5902 
Implement label templates with default ZPL template [SCI-5902]
 2021-07-21 14:53:27 +02:00
aignatov-bio f2e5dc8b2f
Add printers to addon page [SCI-5904][SCI-5931] (#3450) 
* Add printers to addon page [SCI-5904]

* Fix markup
 2021-07-21 13:48:38 +02:00
Alex Kriuchykhin dfa2a7775d
Merge pull request #3422 from okriuchykhin/ok_SCI_5847 
Fix repository cell joining and preloading [SCI-5847]
 2021-07-21 13:18:21 +02:00
Oleksii Kriuchykhin b69ed98e13 Add biomolecular toolkit license endpoint [SCI-5844] 2021-07-21 13:16:27 +02:00
Alex Kriuchykhin e881bf32ae
Merge pull request #3414 from okriuchykhin/ok_SCI_5843 
Add biomolecular toolkit API proxying endpoint [SCI-5843]
 2021-07-21 13:14:04 +02:00
Alex Kriuchykhin dbc54278b2
Merge pull request #3211 from okriuchykhin/ok_SCI_5531 
Add basic API client for BMT [SCI-5531]
 2021-07-21 13:13:52 +02:00
Oleksii Kriuchykhin 36708b47cf Fix code styling [SCI-5531] 2021-07-21 13:10:30 +02:00
aignatov-bio 067758808e
Add download heml button to file preview [SCI-5876] (#3423) 
* Add download heml button to file preview [SCI-5876]

* Remove safe navigation
 2021-07-20 13:22:42 +02:00
aignatov-bio 4de35c983a
Open HELM files in bio eddie [SCI-5890] (#3442) 2021-07-20 13:06:47 +02:00
Martin Artnik c43e1cfbe5 Fixed db error during build 2021-07-20 10:20:47 +02:00
artoscinote 888131a465
Merge branch 'features/bioeddie-integration' into ma_SCI_5879 2021-07-20 09:48:13 +02:00
artoscinote 3a281ce9dc
Merge pull request #3433 from artoscinote/ma_SCI_5607 
Also send notification to the user that was unassigned from task [SCI-5607]
 2021-07-20 09:41:46 +02:00
aignatov-bio 53456988ba
Add bioEddie activities and user licenses [SCI-5845][SCI-5842] (#3411) 
* Add bio eddie licens to users [SCI-5845]

* Add activities for BioEddie [SCI-5842]
 2021-07-19 21:33:28 +02:00
Martin Artnik f55761a491 Invite member search design fixes [SCI-5892] 2021-07-19 15:42:26 +02:00
artoscinote 5f9c04844f
Added prefixed IDs to repository rows (items) [SCI-5909] (#3441) 
* Added prefixed IDs to repository rows (items) [SCI-5909]

* Fix prefixed id queries to work with joins, use subquery in repository search [SCI-5909]

* Fixed accessing repository_row parent code [SCI-5909]

* Better handling of repository_row code display [SCI-5909]

* Fix index warning for id prefixed models issue setting up project [SCI-5909]
 2021-07-19 14:23:36 +02:00
Martin Artnik c4b106f2b8 Fix style of experiment id in dropdown [SCI-5893] 2021-07-19 12:53:15 +02:00
Martin Artnik 71aa418dc6 Fixed UX issues in user invites modal [SCI-5898] 2021-07-19 12:39:18 +02:00
Martin Artnik a8f8ab8ba9 Implement label templates with default ZPL template [SCI-5902] 2021-07-19 09:44:14 +02:00
Oleksii Kriuchykhin 1c8b32dffc Add biomolecular toolkit API proxying endpoint [SCI-5843] 2021-07-16 15:58:40 +02:00
Oleksii Kriuchykhin 7204e47ba5 Fix sorting by role with filtering in team members table [SCI-5908] 2021-07-16 10:49:41 +02:00
Martin Artnik 96a5b97bdb Implement Save & Register molecule [SCI-5879] 2021-07-15 12:37:04 +02:00
Martin Artnik ff0ac9f497 Fix free invite users modal [SCI-5900] 2021-07-13 15:51:05 +02:00
Martin Artnik 1985b7a7e0 Also send task unassign notification to the person that was unassigned [SCI-5607] 2021-07-13 12:11:49 +02:00
zmagoD 277da3abcf fix merge issues 2021-07-10 15:20:55 +02:00
artoscinote d78e4713c8
Merge pull request #3425 from artoscinote/ma_SCI_5099 
Fix styling, functionality issues with invite users modal [SCI-5099]
 2021-07-09 11:26:19 +02:00
Martin Artnik 40a8f3a434 Switch to using dropdownSelector for emails input [SCI-5099] 2021-07-09 11:20:48 +02:00
Martin Artnik 3cb395db15 Use where_attributes like in team search [SCI-5099] 2021-07-09 10:49:11 +02:00
Martin Artnik fe06effbd7 Fix linter errors [SCI-5099] 2021-07-09 09:40:06 +02:00
Martin Artnik fb040bee07 Fix styling, functionality issues with invite users modal [SCI-5099] 2021-07-08 16:10:20 +02:00
Miha Mencin d240c9f769
Merge pull request #3421 from artoscinote/ma_SCI_5870 
Added pdf viewer js pack to my_module archive view, fixed issue with files getting stuck in processing [SCI-5870]
 2021-07-08 12:01:31 +02:00
Oleksii Kriuchykhin 549fc8e5a0 Fix repository cell joining and preloading [SCI-5847] 2021-07-07 17:43:51 +02:00
Martin Artnik fdf9c5f6ae Reset file_processing when new file is upladed [SCI-5870] 2021-07-07 14:57:35 +02:00
Oleksii Kriuchykhin d1208bad0b Merge branch 'develop' into features/new_permissions 2021-07-07 13:44:36 +02:00
Martin Artnik 42ed28676d Added pdf viewer js pack to my_module archive view [SCI-5870] 2021-07-07 11:34:28 +02:00
Martin Artnik 0c63013d8b Made 2fa enable modal accessible globally [SCI-5856] 2021-07-05 16:50:37 +02:00
artoscinote 52946d18e0
Merge pull request #3416 from artoscinote/ma_SCI_5099 
Rework the team invite modal functionality on members page [SCI-5099]
 2021-07-05 12:41:04 +02:00
Martin Artnik 5f528fcdb5 Rework the team invite modal functionality on members page [SCI-5099] 2021-07-05 12:39:54 +02:00
Martin Artnik 1c98d7cdd2 Fixed missing archived column in experiment table [SCI-5866] 2021-07-02 16:10:35 +02:00
Alex Kriuchykhin 0e813791fe
Merge pull request #3413 from aignatov-bio/ai-sci-5832-issue-in-reports-with-pip-file 
Fix file icons in report [SCI-5832]
 2021-07-02 10:20:18 +02:00
Alex Kriuchykhin 6450e221a9
Merge pull request #3412 from aignatov-bio/ai-sci-5568-add-missed-activity-for-tag-removing 
Add missed activity for tag removing [SCI-5568]
 2021-07-02 10:18:26 +02:00
Alex Kriuchykhin 38912b1b38
Merge pull request #3406 from aignatov-bio/ai-sci-5834-update-marvinjs-image-generation 
Update marvinJS image generation [SCI-5834]
 2021-07-02 10:12:48 +02:00
aignatov-bio d0b4a75095 Fix file icons in report 2021-06-30 14:35:23 +02:00
Alex Kriuchykhin f835f88e64
Merge pull request #3410 from okriuchykhin/ok_SCI_5097 
Update Invite new user to team modal [SCI-5097]
 2021-06-30 13:34:06 +02:00
aignatov-bio bef57eacac Add missed activtiy for tag removing [SCI-5568] 2021-06-30 13:34:02 +02:00
Martin Artnik 3662365cac Small code style tweak SCI-5800 2021-06-30 13:15:08 +02:00
Martin Artnik 618f5cfb53 Code style fixes [SCI-5800] 2021-06-30 13:08:16 +02:00
artoscinote 723b594632
Merge pull request #3398 from artoscinote/ma_SCI_5828 
Expose experiment IDs in interface and reports [SCI-5828]
 2021-06-30 12:58:25 +02:00
Martin Artnik e1b0b65465 Improved code style, fixed bug [SCI-5828] 2021-06-29 15:57:23 +02:00
artoscinote 73c86c8423
Merge pull request #3409 from artoscinote/ma_SCI_5851 
Report generation fixes [SCI-5851]
 2021-06-29 14:55:26 +02:00
Martin Artnik b623e2f40f Report generation fixes [SCI-5851] 2021-06-29 13:46:45 +02:00
Oleksii Kriuchykhin ecec1ce194 Update Invite new user to team modal [SCI-5097] 2021-06-29 13:46:02 +02:00
artoscinote 9804e1bd28
Merge pull request #3400 from artoscinote/ma_SCI_5701 
Reworked task view sidebar [SCI-5701]
 2021-06-29 11:26:56 +02:00
zmagoD 9c812e84bd setup logic to group assign all team members and handle the unassignments logic 2021-06-27 13:22:19 +02:00
zmagoD a678f07b47 update extends and remove format from links 2021-06-27 09:45:32 +02:00
aignatov-bio 53b47412ee Update marvinJS image generation [SCI-5834] 2021-06-24 22:36:51 +02:00
aignatov-bio 786e74e4de
Add BioEddie integration [SCI-5654][SCI-5657][SCI-5658][SCI-5670] (#3391) 
* Add backend for bioeddie [SCI-5654]

* Add modal for bioeddie [SCI-5654]

* Add bio eddie editor to steps and results [SCI-5654]

* Fix markup and code styling
 2021-06-23 19:48:44 +02:00
Martin Artnik b2e2186d9f Remove unnecessary tasks hash from full export [SCI-5840] 2021-06-22 14:57:07 +02:00
Martin Artnik c6c5f75262 Remove unncessary newline 2021-06-22 14:53:03 +02:00
Martin Artnik c4e6b0bbaf Fixed export all report html generation [SCI-5840] 2021-06-22 14:50:47 +02:00
Martin Artnik d67d53b926 Code style fixes 2021-06-22 13:27:03 +02:00
Martin Artnik eaa713f5b8 Fix indices [SCI-5829] 2021-06-22 12:51:25 +02:00
Martin Artnik a32219b1aa Amend how PDF report generation works [SCI-5837] 2021-06-21 14:20:30 +02:00
Martin Artnik 66d2e65114 Fixed report docx generation [SCI-5837] 2021-06-21 12:52:12 +02:00
zmagoD 9b87fce840 add read check to view methods 2021-06-20 11:11:03 +02:00
zmagoD ad10befcc4 add new manage access permission to PET levels 2021-06-19 17:17:57 +02:00
Martin Artnik b6588c2334 Reworked task view sidebar [SCI-5701] 2021-06-18 16:52:19 +02:00
Oleksii Kriuchykhin 7d31b99386 Revert to fontawesome CDN link in reports and update wicked_pdf [SCI-5650] 2021-06-18 15:03:17 +02:00
Martin Artnik 879cf5081d Added experiment code to experiment cards filter [SCI-5829] 2021-06-18 14:38:07 +02:00
Martin Artnik a9d6c4bb94 Code style fixes [SCI-5828] 2021-06-18 14:19:35 +02:00
Martin Artnik afc1b2d8b6 Added experiment code to PDF and DOCX [SCI-5830] 2021-06-18 14:14:02 +02:00
Martin Artnik 29ff910eba Added searching experiments by EX[ID] [SCI-5829] 2021-06-18 14:12:59 +02:00
Martin Artnik 0866a2e251 Added experiment ID to card and table views [SCI-5828] 2021-06-18 14:12:59 +02:00
Oleksii Kriuchykhin bb458abec6 Remove old reports code [SCI-5650] 2021-06-18 10:40:00 +02:00
Alex Kriuchykhin 945d5ea6c6
Merge pull request #3397 from okriuchykhin/ok_SCI_5831 
Fix repositories selection in report wizard and deleted repositories handling [SCI-5831]
 2021-06-18 10:35:59 +02:00
Oleksii Kriuchykhin c03535f027 Code style improvements [SCI-5831] 2021-06-18 10:33:31 +02:00
Martin Artnik 56847e46a6 Don't schedule inactive webhooks 2021-06-18 00:13:37 +02:00
Martin Artnik c6648111f3 Code style fixes [SCI-5800] 2021-06-17 22:00:13 +02:00
Oleksii Kriuchykhin 1e3197875c Fix repositories selection in report wizard and deleted repositories handling [SCI-5831] 2021-06-17 16:23:27 +02:00
Martin Artnik 47071e23a1 Added specs for webhooks 2021-06-17 14:54:30 +02:00
artoscinote 5cadc388f8
Merge pull request #3395 from artoscinote/ma_SCI_5833 
Fixed generating status update when regenerating pdf [SCI-5833]
 2021-06-17 12:22:06 +02:00
Alex Kriuchykhin 4caa5f9ac1
Merge pull request #3394 from okriuchykhin/ok_SCI_5776_v2 
Fix repository snapshots for export all [SCI-5776]
 2021-06-17 11:35:16 +02:00
Martin Artnik 4b23ca271c Fixed generating status update when regenerating pdf [SCI-5833] 2021-06-17 09:51:25 +02:00
Martin Artnik 4ee50f87d5 Implement webhook service and scheduling jobs [SCI-5801, SCI-5802] 2021-06-17 09:19:04 +02:00
Oleksii Kriuchykhin 85a5cca98a Fix repository snapshots for export all [SCI-5776] 2021-06-16 16:17:12 +02:00
aignatov-bio 12d8b84cfd
Fix snapshots for deleted inventory [SCI-5826] (#3393) 2021-06-16 15:23:34 +02:00
Alex Kriuchykhin 1e830a49f3
Merge pull request #3392 from okriuchykhin/ok_SCI_5816 
Fix API date time serializers [SCI-5816]
 2021-06-16 12:28:16 +02:00
Alex Kriuchykhin b73972dbbf
Merge pull request #3389 from artoscinote/ma_SCI_5819 
Set scinote template if missing when generating reports [SCI-5819]
 2021-06-16 12:27:02 +02:00
Alex Kriuchykhin b053c25757
Merge pull request #3388 from okriuchykhin/ok_SCI_5815 
Fix user preferences date format selector [SCI-5815]
 2021-06-16 12:26:50 +02:00
aignatov-bio 7313b5fa16
Add archived and deleted repositories to reports [SCI-5781] (#3387) 
* Add archived and deleted repositories to reports [SCI-5781]

* Small markup fix [SCI-5781]
 2021-06-16 10:56:08 +02:00
artoscinote 2763f5cf89
Merge pull request #3383 from artoscinote/ma_SCI_5780 
Fixed fade-out gradients in Safari [SCI-5780]
 2021-06-16 10:23:23 +02:00
Oleksii Kriuchykhin 7537542c0a Fix API date time serializers [SCI-5816] 2021-06-15 17:12:55 +02:00
Martin Artnik 6cf9ea5bc0 Implement Activity -> ActivityFilter matching service [SCI-5800] 2021-06-15 16:13:28 +02:00
Martin Artnik 5137a5b1a3 Fix illegal return statement [SCI-5634] 2021-06-15 13:16:51 +02:00
Martin Artnik 2427086372 Set scinote template if missing when generating reports [SCI-5819] 2021-06-15 12:54:48 +02:00
Oleksii Kriuchykhin b132a13698 Fix user preferences date format selector [SCI-5815] 2021-06-15 11:15:46 +02:00
Miha Mencin b7513c6d5f
Merge pull request #3381 from aignatov-bio/ai-sci-5799-add-dynamic-logo-to-reports 
Add dynamic logo to default report [SCI-5799]
 2021-06-15 07:36:48 +02:00
Miha Mencin d25fc077dc
Merge pull request #3386 from artoscinote/ma_SCI_5814 
Fixed emails for successful report file generation [SCI-5814]
 2021-06-15 07:36:10 +02:00
Martin Artnik 380473c825 Fixed emails for successful report file generation [SCI-5814] 2021-06-14 13:25:50 +02:00
aignatov-bio 9103fcf356
Add project header to reports [SCI-5798] (#3380) 2021-06-14 12:42:18 +02:00
aignatov-bio 0e87c44c4f
Fix empty elements in docx rtf table [SCI-5659] (#3382) 2021-06-14 12:41:34 +02:00
artoscinote 04155f5d60
Merge pull request #3384 from artoscinote/ma_SCI_5810 
Handle old reports with no templates properly [SCI-5810]
 2021-06-14 12:36:20 +02:00
Martin Artnik 1924100b4f Add missing class, so docx report status updates [SCI-5788] 2021-06-14 12:27:25 +02:00
Martin Artnik 20484cfe5c Handle old reports with no templates properly [SCI-5810] 2021-06-14 10:53:46 +02:00
Martin Artnik b5976312ba Fixed fade-out gradients in Safari [SCI-5780] 2021-06-14 09:19:25 +02:00
zmagoD 25802d7043 adopt move/clone my module logic to work with new user assignments (SCI-5805) 2021-06-12 18:51:55 +02:00
zmagoD 9f3195aa76 hide experiment actions dropdown when the user can't manage the experiment (SCI-5790) 2021-06-12 11:15:44 +02:00
zmagoD 7128987418 fix code style 2021-06-12 10:58:26 +02:00
zmagoD 7e4f47f667 update experiment and my_module search 2021-06-12 10:27:53 +02:00
zmagoD 8997ba10d1 mark user assigmetns when they are created manually or automatically 2021-06-12 09:36:41 +02:00
aignatov-bio ea94ce19b1 Add dynamic logo to default report [SCI-5799] 2021-06-10 15:29:28 +02:00
Miha Mencin dc72bfc527
Merge pull request #3379 from okriuchykhin/ok_SCI_5776 
Remove forgotten byebug assertion [SCI-5776]
 2021-06-10 13:08:39 +02:00
Oleksii Kriuchykhin 8b1a9a1b7c Remove forgotten byebug assertion [SCI-5776] 2021-06-10 13:06:31 +02:00
artoscinote d43f7180c1
Merge pull request #3377 from artoscinote/ma_SCI_5794 
Lock repository_row before inserting RepositoryCell  [SCI-5794]
 2021-06-10 12:46:41 +02:00
Martin Artnik c17192730e Lock repository_row before inserting RepositoryCell in SavePdfToInventoryItem [SCI-5794] 2021-06-09 15:44:38 +02:00
Miha Mencin 60c309e1cd
Merge pull request #3375 from artoscinote/ma_SCI_5787 
Fix changing report project, fix typo [SCI-5787]
 2021-06-09 13:43:23 +02:00
aignatov-bio afe2a19c88
Add webhooks management [SCI-5767] (#3376) 
* Add webhooks managment [SCI-5767]

* Markup fixes [SCI-5676]
 2021-06-09 12:53:11 +02:00
Miha Mencin 48202c88d1
Merge pull request #3350 from aignatov-bio/ai-sci-5601-add-pdf-preview-for-docx-report 
Add pdf preview for docx reports [SCI-5601]
 2021-06-09 11:27:45 +02:00