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Author SHA1 Message Date
zmagod 25dcfe66ae Merge branch 'master' of https://github.com/biosistemika/scinote-web into zd_SCI_1960 2018-02-01 16:04:05 +01:00
Zanz2 e8f6dc0d24
Merge pull request #962 from Zanz2/missing_error_SCI1993 
A red error messagge is now displayed when not selecting protocol [SCI-1993]
 2018-01-26 16:00:15 +01:00
Oleksii Kriuchykhin 7c14800570 Change base class for API controller [SCI-1966] 2018-01-26 13:34:38 +01:00
Zanz2 e041426a09
Merge pull request #964 from Zanz2/steps_order_SCI1816 
Steps order fix [SCI-1816]
 2018-01-26 11:32:28 +01:00
okriuchykhin 94f604ae17
Merge pull request #961 from okriuchykhin/ok_SCI_1994 
Actually return 404 when requested asset doesn't exist [SCI-1994]
 2018-01-26 11:14:59 +01:00
Zanz2 4ee51959eb fixed hound 2018-01-26 09:56:59 +01:00
Zanz2 346f9feaef Refactored pull request, but also just did a quick fix on a bug where special characters in titles of steps (% & #) got escaped by sanitize helper, now the string gets sanitized first, then the special characters get unescaped by CGI. unescape html 2018-01-26 09:34:58 +01:00
Zanz2 24e772d7e5 Merge branch 'steps_order_SCI1816' of https://github.com/Zanz2/scinote-web into steps_order_SCI1816 2018-01-26 08:26:38 +01:00
Zanz2 fc541147c8 A red error messagge is now displayed when selecting no protocol and pressing upload on protocols io import, and after the modal is closed the messagge is gone 2018-01-25 15:54:38 +01:00
okriuchykhin 0b1f43c1c5
Merge pull request #954 from okriuchykhin/ok_SCI_1970 
Add health check endpoint to API controller [SCI-1970]
 2018-01-25 14:33:37 +01:00
Oleksii Kriuchykhin 7dd9121072 Actually return 404 when requested asset doesn't exist [SCI-1994] 2018-01-25 14:30:04 +01:00
mlorb ab2955c9bb
Merge pull request #956 from mlorb/ml-sci-1491 
Add notification for previous task has been completed [SCI-1491]
 2018-01-25 11:35:19 +01:00
zmagod 9b836d04fa fixes per @mlorb 's request 2018-01-24 13:21:53 +01:00
Zanz2 7fe1c20ebe Finished the protocol reorder functions and implemented them 2018-01-24 09:31:43 +01:00
Mojca Lorber ac8b1769be add notification for previous task has been completed 2018-01-23 15:53:33 +01:00
zmagod f8a3fca2db Merge branch 'master' of https://github.com/biosistemika/scinote-web into decoupling 2018-01-23 11:06:33 +01:00
Oleksii Kriuchykhin 28be7c4fc4 Add health check endpoint to API controller [SCI-1970] 2018-01-22 16:52:48 +01:00
zmagod ee7c646b1d update user settings controllers to new permission system [fixes SCI-1960] 2018-01-22 16:42:26 +01:00
Oleksii Kriuchykhin 91468faaf9 Fix addons display in info modal [SCI-1875] 2018-01-17 18:30:55 +01:00
zmagod 488dba378e fixes bug in the invitation_controller with full_name sanitization [fixes SCI-1944] 2018-01-17 15:06:43 +01:00
okriuchykhin 38aaaa011c
Merge pull request #936 from okriuchykhin/ok_SCI_1939 
Fix repository records import [SCI-1939]
 2018-01-17 12:55:11 +01:00
Oleksii Kriuchykhin 3c8d8e2fbb Fix samples import [SCI-1946] 2018-01-16 17:50:33 +01:00
Oleksii Kriuchykhin a64012237e Fix repository records import [SCI-1939] 2018-01-15 18:01:35 +01:00
Zmago Devetak ebd354e4d5
Merge pull request #900 from ZmagoD/zd_SCI_1854 
adds premissions service to FE
 2018-01-12 14:24:28 +01:00
Zanz2 b105920d4e
Merge pull request #901 from Zanz2/code_refactor 
Protocols.io code beautification and refactoring [SCI-1929]
 2018-01-12 12:34:00 +01:00
zmagod 371491c259 refactor 2018-01-12 11:38:52 +01:00
mlorb aba426091c add render 403 for create team permission 2018-01-10 10:47:45 +01:00
mlorb 6c4514f550 add create_teams permission checks 2018-01-09 15:28:27 +01:00
zmagod 0d7c116de1 Merge branch 'decoupling-settings-page' of https://github.com/biosistemika/scinote-web into zd_SCI_1854 2018-01-09 10:03:02 +01:00
zmagod c5379896c0 fix HOC to recive objects 2018-01-08 16:28:20 +01:00
Zmago Devetak 0e6931b1f3
Merge pull request #908 from ZmagoD/zd_SCI_1866 
Wrong date at activity
 2018-01-08 14:20:26 +01:00
zmagod c07f54a0c7 Merge branch 'decoupling-settings-page' of https://github.com/biosistemika/scinote-web into zd_SCI_1854 2018-01-08 08:38:14 +01:00
zmagod eb8124ea5a follow @duco 's suggestions 2018-01-05 17:08:00 +01:00
mlorb e76ec7f4a4
Merge pull request #911 from mlorb/ml-sci-1797 
Permissions - refactor organization & team level permissions (core) [SCI-1797]
 2018-01-05 16:03:55 +01:00
mlorb 99185871c4 fix naming things 2018-01-05 15:15:50 +01:00
mlorb 70ae14a9b8 refactor manage repository permissions again because of addons 2018-01-05 11:17:01 +01:00
mlorb ec851caa80 refactor manage repository column permissions again because of addons 2018-01-05 10:43:59 +01:00
zmagod 862b73cae7 Merge branch 'decoupling-settings-page' of https://github.com/biosistemika/scinote-web into zd_SCI_1866 2018-01-05 09:13:43 +01:00
okriuchykhin b0f8c36677
Merge pull request #917 from okriuchykhin/ok_SCI_1870 
Fix adding users to a task [SCI-1870]
 2018-01-04 14:14:05 +01:00
mlorb abced181d5 refactor manage repository rows permissions again because of addons 2018-01-04 11:53:58 +01:00
zmagod e0e3ef9359 fixes flow, and before_action in permissions_controller 2018-01-03 17:23:50 +01:00
mlorb 0c519b8f03 refactor manage sample elements permissions again because of addons 2018-01-03 16:37:02 +01:00
zmagod 1d3881b649 fixes bug with duplicated activities and wrong date separators [fixes SCI-1866] 2018-01-03 13:48:59 +01:00
mlorb dc68b3068b fix Rails 5.1 bug with params 2018-01-03 13:19:56 +01:00
mlorb 0774b6f7e6 refactor manage samples permissions again, so that addons permissions can be added 2017-12-20 16:05:05 +01:00
Oleksii Kriuchykhin 49ae9bcd55 Fix adding users to a task [SCI-1870] 2017-12-20 13:44:21 +01:00
Oleksii Kriuchykhin 512ee07bde Fix repositories [SCI-1873] 2017-12-19 17:53:45 +01:00
Luka Murn cf291bf887 Merge branch 'gilson-iot-rails4' 
Conflicts:
	Gemfile.lock
 2017-12-19 10:56:39 +01:00
mlorb bd7eda1506 fix failing tests 2017-12-14 14:18:18 +01:00
mlorb 2936770c01 refactor can view team users ATWHO permission 2017-12-14 14:18:18 +01:00
mlorb 5c790287ec refactor again manage user team permissions 2017-12-14 14:18:18 +01:00
mlorb 7c1ae6bc82 refactor manage repository permissions 2017-12-14 14:18:18 +01:00
mlorb 2918a9833d refactor manage repository column permissions 2017-12-14 14:18:18 +01:00
mlorb 3f5e9e60b7 refactor view repository permission 2017-12-14 14:18:18 +01:00
mlorb 079ac7a4d3 refactor manage repository row permissions 2017-12-14 14:18:18 +01:00
mlorb 740ecc674b refactor view repositories permission 2017-12-14 14:18:18 +01:00
mlorb 3ca51f097f refactor manage sample permissions again by removing authorship and refactor manage sample elements permissions 2017-12-14 14:18:17 +01:00
mlorb e577b363b2 byTheWay fix of Rails 5.1 bug 2017-12-14 14:18:17 +01:00
mlorb 29f9414839 refactor create project permission 2017-12-14 14:18:17 +01:00
mlorb 72023c7dfe refactor update/delete sample permissions 2017-12-14 14:18:17 +01:00
mlorb b09377cd8d refactor update sample permission 2017-12-14 14:18:17 +01:00
mlorb f801ed8eb6 refactor view/export samples permission 2017-12-14 14:18:16 +01:00
mlorb 0d37f9c85a refactor clone protocol permission 2017-12-14 14:18:16 +01:00
mlorb f6d36ae6a2 refactor update protocol type in repository 2017-12-14 14:18:16 +01:00
mlorb 806fcbce36 refactor update protocol in repository permission 2017-12-14 14:18:16 +01:00
mlorb e0d1ae174e refactor read protocol in repository permission 2017-12-14 14:18:15 +01:00
mlorb a3a494c3a2 fix banana: remove dead code which strangely reappeared, probably with some rebasing 2017-12-14 14:18:15 +01:00
mlorb ccc2451494 refactor create sample permissions 2017-12-14 14:18:15 +01:00
mlorb 43c01b74b1 refactor create protocol permission 2017-12-14 14:18:14 +01:00
mlorb 11a3cd196c add create, update team permission and refactor 422 respond handling in controllers 2017-12-14 14:18:14 +01:00
mlorb 8893fd668d add create, update, delete user_team permission 2017-12-14 14:18:14 +01:00
mlorb a0b2d3f5ef refactor read_team permission 2017-12-14 14:18:14 +01:00
zmagod 219ef3baf6 setup new pagination for activities 2017-12-14 14:02:40 +01:00
zmagod 249d3d7698 fixes current timezone setup for activities 2017-12-13 16:48:31 +01:00
okriuchykhin 2fa7591f36
Merge pull request #903 from okriuchykhin/ok_SCI_1864 
Rename notifications settings accessor [SCI-1864]
 2017-12-13 12:57:56 +01:00
Oleksii Kriuchykhin baf3151bb0 Fix notification settings accessors [SCI-1864] 2017-12-13 11:59:53 +01:00
zmagod b106545d31 fixes per @duco 's request 2017-12-13 08:57:50 +01:00
Zmago Devetak 00be4460cc
Merge pull request #806 from ZmagoD/disable_tiny_mce_asset_unless_step 
Fixes bug with embedded images [SCI-1624]
 2017-12-12 09:53:24 +01:00
Oleksii Kriuchykhin 6256acdfea Rename notifications settings accessor [SCI-1864] 2017-12-07 13:59:33 +01:00
Luka Murn 86ac07c69f
Merge pull request #902 from biosistemika/rails-5.1 
Merge rails-5.1 into decoupling-settings-page
 2017-12-07 09:25:11 +01:00
okriuchykhin b3b0e367e8
Merge pull request #889 from okriuchykhin/ok_SCI_1747 
Improve server side assets validation display for steps [SCI-1747]
 2017-12-04 14:12:43 +01:00
zmagod e01e7bebbf add permissions endpoint on the API 2017-12-04 13:25:48 +01:00
Zanz2 835ac6910f Code refactor part 1 2017-12-02 00:29:47 +01:00
zmagod 52b278fe78 adds premissions service to FE 2017-12-01 17:15:15 +01:00
okriuchykhin 16729ccd7d
Merge pull request #898 from okriuchykhin/ok_SCI_1838 
Fix assignment of users to projects [SCI-1838]
 2017-11-30 11:16:07 +01:00
Oleksii Kriuchykhin 194054d973 Fix assignment of users to projects [SCI-1838] 2017-11-29 22:55:10 +01:00
Oleksii Kriuchykhin 7bb52191cd Fix Ajax calls with redirect [SCI-1837] 2017-11-29 16:13:28 +01:00
Zanz2 bb8aef3b73
Merge pull request #893 from Zanz2/step_desc_2small_SCI-1833 
Fixed validations lengths and added workarounds for bugs [SCI-1833]
 2017-11-24 17:55:20 +01:00
zmagod 066c782cd2 Merge branch 'master' of https://github.com/biosistemika/scinote-web into disable_tiny_mce_asset_unless_step 2017-11-24 16:29:32 +01:00
Zmago Devetak 027f4a5921
Merge pull request #890 from ZmagoD/zd_SCI_1651 
export and import RTE images
 2017-11-24 16:28:28 +01:00
Zanz2 dc5904aed9 Fixed this jira issue and added workarounds for bugs 2017-11-24 01:45:40 +01:00
Zanz2 f577bf93b5 Fixed pull request review 2017-11-21 19:20:15 +01:00
zmagod 91fec89cab adds tiny_mce_assets to protocol export 2017-11-21 16:30:48 +01:00
Oleksii Kriuchykhin fe8b7d26c1 Improve server side assets validation display for steps [SCI-1747] 2017-11-21 13:48:06 +01:00
Zanz2 d8c809ffd0 Reviewed pull request 2017-11-20 23:19:34 +01:00
Zanz2 cf66d94d45 Reworked functions into one function, defined all protocols.io attributes as dynamic constants, applied length checking to all protocols.io attribute fields 2017-11-20 00:59:32 +01:00
Zanz2 fa25a6785b Made the propper files and functionality for the text truncation to function 2017-11-17 02:43:32 +01:00
Zanz2 b2e1623cf1 Merge branch 'master' of https://github.com/biosistemika/scinote-web into validations_cutoff_SCI-1784 2017-11-16 20:04:12 +01:00
Zanz2 c44465817d Added the functions and put in limitations from my validations files, changed controller name, added some locals 2017-11-16 20:03:44 +01:00
Zanz2 1b540a75a1 Fixed to use .megabytes 2017-11-16 15:17:13 +01:00
Zanz2 41c1193a78 Fixed unit error;Now when comparing file size, both are in bytes 2017-11-16 01:34:38 +01:00
Oleksii Kriuchykhin 84f4aba213 Pull latest master into gilson-iot-rails4 2017-11-15 15:15:26 +01:00
mlorb 288e3ddcbd
Merge pull request #877 from mlorb/ml-sci-1190 
Fix bug when removing all keywords in protocol [SCI-1190]
 2017-11-15 11:22:18 +01:00
Mojca Lorber c2a5b52767 fix bug when removing all keywords in protocol 2017-11-14 15:04:37 +01:00
Zanz2 6b9a10ffe4 Made validations for JSON format and .txt and .json files 2017-11-14 12:02:17 +01:00
Zanz2 f35ab78849 Added some code to make the two seperate jira issues work together (protocol info and scinote tables 2017-11-14 00:56:39 +01:00
mlorb cd6799d571
Merge pull request #866 from biosistemika/protocols-io-import 
Protocols io import
 2017-11-13 11:53:28 +01:00
Zanz2 b265beb386
Merge pull request #864 from Zanz2/move_desc 
Move protocol.io protocol description to step 1 of protocols [SCI-1695]
 2017-11-13 10:07:01 +01:00
Zanz2 23d3ffa5a4 Fixed PR 2017-11-12 15:48:45 +01:00
Zanz2 e7384ac38d Code review fixes, made seperate helper file 2017-11-12 15:31:04 +01:00
Zanz2 fa2c0fe556 merging 2017-11-09 18:55:17 +01:00
Zanz2 812fa3f1d5 Hopefully this will resolve my merge problems 2017-11-09 17:42:17 +01:00
zmagod 9eac014f1a Merge branch 'decoupling-settings-page' of https://github.com/biosistemika/scinote-web into zd_SCI_1731 2017-11-09 09:05:22 +01:00
zmagod e2af987b80 Merge branch 'decoupling-settings-page' of https://github.com/biosistemika/scinote-web into zd_SCI_1568 2017-11-09 08:35:39 +01:00
zmagod 54e360bb52 fixes team switch 2017-11-06 15:14:17 +01:00
mlorb 126f278308
Merge pull request #853 from Zanz2/ZZ_import_protocolsio_json 
Scinote protocols IO base branch
 2017-11-06 14:53:01 +01:00
Zanz2 aa03a889c7 Fixed PR review 2017-11-03 16:28:15 +01:00
zmagod 5bc38414d1 Merge branch 'decoupling-settings-page' of https://github.com/biosistemika/scinote-web into zd_SCI_1731 2017-11-03 09:56:44 +01:00
zmagod 2118b31762 adds about sciNote modal 2017-11-02 13:23:57 +01:00
Zanz2 de9a3a1d0d Preview tables are now functional but with inline javascript , ugly styling and a few major bugs (they dont display fully until you click on them, and i dug deep on the handson table wiki and hot table wiki for issues like this, and while they exist, idk how to implement the solutions because they use angular js mostly 2017-10-28 23:57:29 +02:00
Zanz2 2413dc251a Added new preview tables code 2017-10-28 02:19:22 +02:00
okriuchykhin 2e0bf91467 Merge pull request #831 from biosistemika/revert-830-revert-820-lm-sci-1675 
Add Add-ons page to User -> Settings -> Account [SCI-1675], vol. 2
 2017-10-27 11:14:39 +02:00
Zanz2 a732c8afa7 Code for protocol repository scinote table elements view 2017-10-26 17:28:27 +02:00
zmagod 3d22a5404d add scenic gem, teams datatables sql view 2017-10-26 16:59:00 +02:00
zmagod d2ed415a25 Fixes per @okriuchykhin 's request 2017-10-26 10:42:18 +02:00
Zanz2 79e0a11054 Fixed before start and link not displaying in protocol description 2017-10-25 17:39:01 +02:00
zmagod 5e6a4bb69a adds environment variable that disables/enables the creation of new team when user sign up 2017-10-25 15:29:04 +02:00
zmagod c36fcb1fa4 fixes user invitation button [fixes SCI-1726] 2017-10-25 11:31:32 +02:00
Zanz2 19b9da2e83 deleted comment 2017-10-24 19:44:34 +02:00
Zanz2 49501b3d3d Finished review refactor 2017-10-24 19:24:53 +02:00
Luka Murn c026b60790 Update Profile page to use validation 2017-10-23 18:04:20 +02:00
Luka Murn 82f982e983 Merge branch 'rails-5.1' into decoupling-settings-page 
Conflicts:
	Gemfile
	Gemfile.lock
 2017-10-23 10:59:10 +02:00
Luka Murn 8254153bb9 Merge branch 'master' into rails-5.1 
Conflicts:
	Gemfile
	Gemfile.lock
	app/models/connection.rb
	app/models/experiment.rb
	app/models/my_module.rb
 2017-10-23 08:57:57 +02:00
okriuchykhin 44733fefda Merge pull request #839 from okriuchykhin/ok_SCI_1609 
Improve error handling in file uploads [SCI-1609][SCI-1612][SCI-1551]
 2017-10-19 16:26:36 +02:00
Oleksii Kriuchykhin 631b41cdaa Improve error handling in file uploads [SCI-1609][SCI-1612][SCI-1551] 2017-10-19 11:38:23 +02:00
Zanz2 67b09adaeb Fixed last few rubocop errors 2017-10-17 19:43:46 +02:00
Zanz2 6cf775a4b1 Refactored code, made html render on preview too 2017-10-17 19:27:20 +02:00
okriuchykhin 8e90e041b9 Merge pull request #825 from okriuchykhin/ok_SCI_1665 
Optimize memory usage in samples/repositories import [SCI-1665]
 2017-10-17 17:26:00 +02:00
zmagod c554bc5c18 fixes accept invitation bug [fixes SCI-1684] 2017-10-17 16:00:26 +02:00
Oleksii Kriuchykhin cd0aba1896 Change any? to empty? [SCI-1665] 2017-10-17 15:23:54 +02:00
Oleksii Kriuchykhin c8d2ae70fa Move duplicated code to service [SCI-1665] 2017-10-17 14:46:16 +02:00
Luka Murn 4e06b5c397 Revert "Revert "Add Add-ons page to User -> Settings -> Account [SCI-1675]"" 2017-10-17 13:17:49 +02:00
Luka Murn 4d8f2665d3 Revert "Add Add-ons page to User -> Settings -> Account [SCI-1675]" 2017-10-17 13:10:02 +02:00
Luka Murn 2fb2b90da3 Merge pull request #820 from Ducz0r/lm-sci-1675 
Add Add-ons page to User -> Settings -> Account [SCI-1675]
 2017-10-16 13:05:43 +02:00
Zanz2 e72c1bebcb deleted comments 2017-10-12 19:18:22 +02:00
Zanz2 8d0d6f0502 refactored methods 2017-10-12 19:10:16 +02:00
okriuchykhin db9a031581 Merge pull request #813 from okriuchykhin/ok_SCI_1642 
Refactor canvas [SCI-1642]
 2017-10-12 17:45:34 +02:00
Zanz2 21036a1081 Deleted unnecesarry if's 2017-10-12 17:22:02 +02:00
Zanz2 414a15872c Made seperate method for steps mapping 2017-10-12 17:15:43 +02:00
gazvoda 88f03a0706 Merge pull request #735 from gazvoda/lg-SCI-1249-v2 
Truncate checklist items in activity modal [fixes SCI-1249]
 2017-10-12 15:58:05 +02:00